Buttiauxella agrestis: BADSM9389_41550
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Entry
BADSM9389_41550 CDS
T06676
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bage
Buttiauxella agrestis
Pathway
bage03030
DNA replication
bage03410
Base excision repair
bage03420
Nucleotide excision repair
bage03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bage00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BADSM9389_41550
03410 Base excision repair
BADSM9389_41550
03420 Nucleotide excision repair
BADSM9389_41550
03440 Homologous recombination
BADSM9389_41550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bage03032
]
BADSM9389_41550
03400 DNA repair and recombination proteins [BR:
bage03400
]
BADSM9389_41550
Enzymes [BR:
bage01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BADSM9389_41550
DNA replication proteins [BR:
bage03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BADSM9389_41550
DNA repair and recombination proteins [BR:
bage03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BADSM9389_41550
NER (nucleotide excision repair)
GGR (global genome repair) factors
BADSM9389_41550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Prok-E2_E
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
BCG11434
LinkDB
All DBs
Position
complement(4498399..4501191)
Genome browser
AA seq
930 aa
AA seq
DB search
MVQIAQNPLILVDGSSYLYRAYHAFPPLTNSKGEPTGAMYGVLNMLRSLLLQYQPTHAAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT
LALEAERVGRPVLISTGDKDMAQLVTPGVTLINTMTNTILGPDEVQTKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYANPEKIAELTFRGAKTMAAKLEQSK
DLAYLSYKLATIKTDVELELGCEQLEVQQPADEELLELFTQYEFKRWITDVEAGKWLQAK
GAKSATQPKKTIEIETEAEPEEPAIALSHENYVTILEESVLEEWITRLKKAPVIAFDTET
DSLDNISANLVGLSFATEPGVACYIPVAHDYLDAPVQIPRERALEMLKPLLEDESILKVG
QNLKFDRGIMQNYDIELRGIAFDTMLESYILDSVAGRHDMDSLSARWLKHTTITFEEIAG
KGKKQLTFNQIDLEQAGRYAAEDADVTLQLHLKMWPQLEKREGPLSIFKNIEMPLVPVLS
RIERNGVKIDPAVLHTHSEQLTKRLAELEITAHEIAGEPFNLSSPKQLQTILFEKQGIKP
LKKTPGGAPSTSEEVLEELALDYPLPKVILEHRGLAKLKSTYTDKLPLMINPKTGRVHTS
YHQAVAATGRLSSTEPNLQNIPVRNEEGRRIRQAFIAPKDYLIVSADYSQIELRIMAHLS
RDKGLLTAFAEGKDIHRATAAEVFGIPLDNVSGEQRRSAKAINFGLIYGMSAFGLSRQLN
IPRKESQKYMDLYFERYPGVLEYMERTRKQAKEQGYVETLDGRRLYLPDINSSNAARRAG
AERAAINAPMQGTAADIIKRAMIAVDAWLESEKPRVKMIMQVHDELVFEVHQDDLEAVSK
KIHELMEGSMKLDVPLLVEVGSGVNWDEAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggttcagatcgcgcaaaacccacttatcctcgttgatggctcatcctacctttatcgt
gcttatcatgcctttccaccgctgaccaatagcaaaggtgaaccaacaggagcaatgtac
ggtgtgctgaacatgctgcgcagtcttctgttgcagtatcaaccgacccacgcagcagtg
gtttttgatgctaaaggcaaaaccttccgtgacgaattgttcgagcattacaaatctcat
cgcccgccaatgcccgacgatctgcgtgcgcaaatagaacctctccatgcgatggttaaa
gccatgggcttgcctctcctggcggtttcaggcgtggaagctgacgatgtgattggtaca
ctggcgcttgaagctgagcgtgttggtcgcccggtgttgattagtaccggcgataaagat
atggcgcagttggttacaccgggcgttacgcttatcaataccatgaccaataccattctt
ggcccggatgaagtccagactaaatatggcgtgccgccagaactcatcatcgacttcctg
gcattaatgggcgactcgtcagataacatccctggtgtgccgggcgttggcgagaaaaca
gcacaggcgctgctacaaggcttaggtggactggatacgctgtatgccaacccagagaaa
atcgcagaattaaccttccgtggtgcaaaaaccatggcggcgaagcttgaacaaagcaaa
gatcttgcttacctctcctataaactggcgaccattaaaacggacgttgagcttgaactc
ggttgcgagcaattagaagtgcagcagcctgcagacgaagagcttcttgagctgttcaca
caatatgaattcaaacgctggattaccgacgtagaagctggcaaatggttgcaggccaag
ggcgcgaagagtgctactcagcctaaaaaaaccattgagattgaaaccgaagctgaacca
gaagagccagcaattgccctttctcacgaaaactacgtcactattcttgaagaaagcgtg
cttgaagaatggattactcgcctgaagaaagcacctgtcatcgcctttgacacggaaact
gacagtctggacaacatcagcgcgaatctggtcggtctttcatttgctacggagccgggc
gttgcgtgctatataccggttgcgcatgactatttagatgcccctgtgcaaattcctcgc
gaacgcgcactcgagatgttgaagccgctacttgaagatgaaagcattcttaaggttggg
caaaacctcaagtttgaccgtggcatcatgcaaaactacgatatcgaacttcgcggaatt
gcgttcgataccatgctcgagtcctatattcttgatagcgttgcaggacgtcatgacatg
gacagcctttccgcacgctggttgaagcacacaactatcacttttgaagagattgctgga
aaaggtaaaaagcagctgaccttcaaccagatagatctcgagcaggccgggcgttacgcc
gcagaagatgcagacgtgaccttgcagttgcacctgaaaatgtggcctcagcttgaaaag
cgtgaagggccattaagtatcttcaaaaatattgagatgccgctggtgcccgtgctttca
cgcattgaacgcaatggcgtgaagatcgatccggctgtgctgcatacgcattctgagcaa
ctgacaaaacgcctcgctgagctggaaatcaccgctcacgaaatcgcgggtgagccgttt
aatctctcttctccaaagcagctgcaaaccattctgtttgaaaaacagggaattaagccg
ctgaagaaaaccccaggcggcgcaccgtccacatctgaagaagtgctggaagagctggct
ctggactatccattgcctaaagttattcttgagcatcgtgggctggcaaaactgaaatcg
acttataccgataagctgccgctgatgattaacccgaaaacggggcgtgtacacacttct
tatcatcaggctgttgcggcaaccgggcgtttatcttcaaccgagccaaacctgcaaaat
attccagtgcgtaatgaagaaggtcgtcgtattcgtcaggcctttattgcgccgaaagat
tacctgattgtttctgccgactactcgcaaattgaactgcgcatcatggcgcatttatct
cgcgataaagggctgctgacggcgtttgctgaaggcaaagatattcaccgcgcgacggct
gcggaagtattcggtattccgctggataatgtttctggagagcaacgccgcagcgcgaaa
gcgatcaacttcggtttgatttacggcatgagtgcgtttggtttgtcacgccagctcaat
attccgcgaaaagagtcgcagaaatacatggacctctacttcgagcgctatccgggtgtc
ctggaatatatggagcgtactcgcaagcaggcaaaagagcagggttatgtcgaaacgctg
gatggccgccgtctttatttacctgatatcaattccagcaatgcggctcgtcgcgcaggt
gctgaacgtgcggctatcaacgccccaatgcagggaacggcagccgatattatcaagcgt
gccatgattgctgtcgatgcctggcttgaatcagaaaagccgcgtgtgaaaatgatcatg
caggtacacgatgaactggtgtttgaagtgcatcaagatgatctggaagccgtatcgaag
aaaattcacgagctgatggaaggcagcatgaaacttgatgtgccgttgctggtggaagtt
ggaagcggtgtaaactgggatgaagctcactaa
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