Buttiauxella agrestis: BADSM9389_41930
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Entry
BADSM9389_41930 CDS
T06676
Name
(GenBank) right-handed parallel beta-helix repeat-containing protein
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
bage
Buttiauxella agrestis
Pathway
bage00040
Pentose and glucuronate interconversions
bage01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bage00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
BADSM9389_41930
Enzymes [BR:
bage01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
BADSM9389_41930
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Gene cluster
GFIT
Motif
Pfam:
Beta_helix
Chondroitinas_B
Pel9A-like_beta_helix
YscW
Motif
Other DBs
NCBI-ProteinID:
BCG11467
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All DBs
Position
complement(4537358..4539535)
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AA seq
725 aa
AA seq
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MASKIPLALTLCGVALSLPATAQQQPIWHAIAFGQSTDVNFSSNVLPEKVGVNNVTIDGK
KLTTADNADLSKPITIESRGGKIANSHDGLTFFYTALPASENFVLQATVTVDQFGPENGA
KPAAQEGAGLLVRDVLGNPRQEPLKEGYEEFPAASNMVMNAIMTQDKKDASRVKMQAIAR
DGISQPWGNTGSTISRKSYQEAVDLGKMPTFRMKLERTNEGFITSWAAAGSDTWVSENVK
RADIITAQDKNQYYVGFFASRNAKITVSDASLETSAAQTVASAAFEPKAWPVVMQIASPP
KSTTSEYVVQARANYDGNFTVRQDEVVIGQEKAAKAGEMFSLPTTLKERNSFTVTFTPTS
GKTKTPVSQSFDVEQVKNLNGSTLYVAPNGVSSNQGSKEAPLDLASAISLIQPGGKIILS
RGEYPQTTIPTPDSGLKGKLKTLEADGKVVIRGLLLDGNYWHVKGIEVTDKSLRVQGSNN
LIENVVAYKNDDTGIQISSPADVGRPLWASYNRVVNSESFNNEDPGKINADGFAVKMRVG
DGNRLEGCYAHDNIDDGYDLFNKIEDGANGVVMIENSIARNNTSNGFKLGGEGQPVAHEI
HNSIAIGNHLDGFTDNFNPGALVVANNVAVDNQRFNYIFRPSPYGSAETQGKFTDNISLR
STDGKYDDAISGRVDSNNYFIRDGKTENSEGKQLSVKDYQSLTLPVPLQRNADGSFKTGE
FLTKQ
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaaaaatacctctggctctcacgctttgcggcgtagctttatcgctaccggca
acagcacagcaacagcccatctggcatgcgattgcttttgggcaatcaacagatgttaac
ttttcatccaacgtattgcctgaaaaagtcggcgtaaataacgtcacgatcgatggcaaa
aaactcactacagctgataacgccgatctttctaaaccgataaccattgagagtcgcggc
ggcaaaattgcgaactctcacgatggactcactttcttctataccgcactgcccgccagt
gagaattttgtcttacaggcaacggtgaccgtcgatcagtttggccctgaaaatggtgcc
aaaccagccgctcaggaaggtgctggtttactggtgagggatgtattaggaaacccgcgc
caggagccgctaaaagagggctacgaagagttcccggcggcgtcaaacatggtgatgaac
gccattatgacgcaggataaaaaagacgcatcgcgcgtcaaaatgcaggcgattgcacgt
gatggcatttcgcagccgtggggaaatactggctcaacgatttcacgtaaaagttatcag
gaagcggtagatctcggcaagatgccgactttccgcatgaaactcgagcgtacaaatgaa
ggttttatcacttcatgggctgcggccggaagcgacacatgggtttctgaaaatgtgaaa
cgcgccgatatcattaccgctcaggataaaaaccaatattacgtgggcttctttgcgtcg
aggaatgcaaaaatcaccgtaagtgatgcgtcactcgaaaccagcgcagcgcaaactgta
gcctcagctgcgttcgagccaaaagcgtggccagtagtgatgcaaattgcttcgccacca
aagagcaccaccagcgaatacgtggtacaggcacgcgctaactatgacggcaacttcacc
gtacgtcaggacgaagttgtgatcggtcaggaaaaagctgcgaaagccggtgaaatgttc
tcactgcctaccacgctgaaagagcgcaacagctttaccgtgacttttaccccaaccagc
ggaaaaaccaaaacacccgtcagccagagctttgacgtcgagcaagtgaaaaacttgaat
ggctctacgctgtacgtcgctccaaatggggtttcaagcaatcaggggtcaaaagaagca
ccattagatttggccagcgcaatatcactcatccaacctggaggaaaaatcatcctgagc
cgtggtgagtacccacaaactaccattccaacccctgacagcggtttaaaaggcaaactg
aaaaccctggaagctgacggcaaagtggtgattcgtggtttattgctcgatggtaactac
tggcatgttaaaggcattgaagtcaccgataagagtttgcgagtgcagggtagcaacaac
cttatcgaaaacgtcgtcgcctataaaaatgacgataccggcattcagatttcctcgcca
gccgatgtaggccgtccactttgggcaagctacaaccgcgtcgttaattctgaatccttc
aacaatgaagacccaggcaaaatcaacgcagatggattcgcggtgaaaatgcgtgtcggg
gatggcaaccgtcttgagggttgttatgcgcacgacaacattgatgatggctatgattta
ttcaacaagattgaagacggcgcgaatggcgttgtgatgatcgagaattcaattgcccgt
aacaacaccagcaacggttttaaattgggtggggaagggcagcctgtcgcacatgaaatc
cacaacagcattgctattggtaaccacctcgatggctttaccgataacttcaatccgggt
gcgctggtggtggcaaataatgttgcggtcgataaccaacgctttaactacatcttccgt
ccaagcccttatggaagtgctgaaactcagggcaagttcaccgataacatttcattgcgc
agtactgacgggaaatatgatgatgccatttccgggcgcgtagatagcaataattacttc
attcgtgatggcaaaacagagaacagcgaagggaagcaactgagtgttaaagattatcag
tcgctgacgttgccagtgcctttgcaacgtaatgccgatggttcatttaaaaccggcgag
tttctgacgaagcagtaa
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