Brevibacillus agri: BA6348_09305
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Entry
BA6348_09305 CDS
T05855
Name
(GenBank) ATP-dependent helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bagr
Brevibacillus agri
Pathway
bagr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bagr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BA6348_09305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bagr03019
]
BA6348_09305
03009 Ribosome biogenesis [BR:
bagr03009
]
BA6348_09305
Enzymes [BR:
bagr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BA6348_09305
Messenger RNA biogenesis [BR:
bagr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BA6348_09305
Ribosome biogenesis [BR:
bagr03009
]
Prokaryotic type
rRNA helicases
BA6348_09305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Ycf1
Motif
Other DBs
NCBI-ProteinID:
QAV12939
LinkDB
All DBs
Position
1870670..1872148
Genome browser
AA seq
492 aa
AA seq
DB search
MAKSFASFGFRPELMQGIQDLYYKDPTPIQEEAIPLILEGKDVIGQAQTGTGKTAAFMLP
ILNRLDAGKRDIQALILTPTRELSIQIAKEVEKLGKHLDVNVLSLHGGTDIDRQLSKLKS
TVHIVVGTPGRVLDHMKRGSLHFGRISTLVLDEADKMMEMGFLEDVEQVIVHTPSQRQVL
LFSATMPDLVKRLAHRFMKQPPHIKIEGKQKTVEKIEQFYYVVNQSDKTDALVDVLEQEQ
PFLTIVFANTQVRVQQLTARLQENGLTAQALYGDLSQSKREQLMRQFREMRFQYLVATDI
AARGLDVEGVTHVINYDLPNDVESYIHRVGRTGRAGQSGKAISLISPRQKNLMGRFAKAT
KASIEERILEPGRHLDAGRRQRAQEREAHFIELRAQQAKEQQKEKDKEFAPVREALKKKA
KVKPGYKKKLARELDELQARYEKNRKKAEAIAARKAGKTVKPADAKKAGRGGASRSAKGA
RPFRQDSGKSRG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatcgtttgcgtcttttggctttcgaccggagctgatgcaagggattcaagac
ctgtactataaagatccgaccccgatccaggaggaagcgattccgctgattctggaaggg
aaagacgtgattggacaagcgcagaccggaacggggaaaacagcggcgttcatgctgccg
atcctgaaccgtctggatgcgggcaaacgcgacattcaagcgctgattctcaccccgacg
cgcgagctgtccattcagatcgccaaagaagtggaaaagctgggcaagcacctcgatgtg
aacgtgctgtctctgcacggcggaacggatatcgacagacagttgagcaagctgaaatcg
actgtacacatcgtcgtgggaacaccgggacgcgtgctggatcacatgaagcgcggctcg
ctgcacttcgggcggatttccacgctcgtgctggacgaggcggacaagatgatggagatg
ggctttttggaggacgtggagcaagtgatcgtccatacgccttcccagcgtcaagtgctg
ctgttttctgcgaccatgccggatttggtaaagcggctggcgcatcgcttcatgaagcag
ccgccgcacatcaagatcgagggcaagcaaaagactgtggagaaaatcgagcagttttac
tacgtagtcaaccaaagcgacaagacggatgcgctcgtggacgtattggagcaggagcag
ccgtttttgaccatcgttttcgccaatacgcaagtgcgcgtgcagcagctcacggctcgc
ctgcaggaaaacggacttacggcgcaagcgctgtacggggacttgtcgcagagcaagcgc
gagcaactgatgcgacagttccgcgaaatgcgcttccagtacctggtggcgacggatatc
gcggcgcgcgggctggacgtcgagggcgtcacgcacgtcatcaactacgatttgccgaat
gacgtggagagctacattcaccgcgtgggccggacagggcgcgccggacagagcggaaaa
gcgatctcgctcatttccccgcgccagaaaaacttgatgggccgcttcgccaaagcgacg
aaggcgtcgattgaagagcggattctggagcctggccgccacctggatgcaggccgtcgc
cagcgcgcccaggagcgcgaggcgcacttcatcgagctgcgcgcccaacaggcaaaagag
cagcaaaaagaaaaagacaaagagttcgctcctgttcgcgaagcattgaagaaaaaagcc
aaggtgaagccgggctacaaaaagaagctggcgcgcgagctggatgagcttcaggcgcga
tacgagaaaaaccgcaaaaaggcggaagcgatcgcggcccgcaaagcaggcaaaaccgtg
aagcccgccgacgccaaaaaagcgggcagaggcggagcaagccgctctgccaaaggggca
aggccgttccgccaagattcgggcaagtcgcgcggataa
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