Brevibacillus agri: BA6348_10770
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Entry
BA6348_10770 CDS
T05855
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
bagr
Brevibacillus agri
Pathway
bagr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bagr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BA6348_10770
09124 Replication and repair
03420 Nucleotide excision repair
BA6348_10770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bagr03021
]
BA6348_10770
03400 DNA repair and recombination proteins [BR:
bagr03400
]
BA6348_10770
Enzymes [BR:
bagr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BA6348_10770
Transcription machinery [BR:
bagr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BA6348_10770
DNA repair and recombination proteins [BR:
bagr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BA6348_10770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
QAV13191
LinkDB
All DBs
Position
complement(2158389..2160053)
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AA seq
554 aa
AA seq
DB search
MSYRPDLPMIVQSDRTILLETQHPQFAEARQAISGFCELLKSPEYIHTYRMTPLSLWNAA
ASGMQPHEVTDILGAYSKYSVPPTIVKEIDETMRKYGLIRLERRGDDLVLHSDDPLVLTE
LAGYKSIAALLEDGYVLKSYARGLIKQELIRLGLPVQDLAGYSQGESCPVSLRANSAVGK
PFALRPYQQEAVDAFYRGGSALGGSGVLVLPCGAGKTVIGIGAISQLQTATLILTTNTTS
VRQWIAELLDKTDLDPELVGEYTGDHKEVKPITVATYQILTYRPTSLDEFPHMKLFSERD
WGLIIYDEVHLLPAPVFRVTSGIQATRRLGLTATLVREDGREEDVFTLIGPKKYEVPWKA
MEDAGWIAEARCREIRLPFEPKWREAYAHATARQKFRIAAENPKKLDVVKKLLERHEGDR
VLIIGQYVDQLEQMATALQLPLITGKVPEKERETLYQQFKKGEITRLIVSKVANFAVDLP
DANVAIQISGTFGSRQEEAQRLGRILRPKTENNTAHFYTLVTRDTREQEFSLHRQLFLVE
QGYPYEIIENEMLV
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
ttgtcttatcgtccagacttgccgatgatcgtgcaaagcgatcgcactattttattggaa
acgcagcatccgcagtttgccgaagccagacaggccatcagcgggttttgcgaactgctg
aaaagcccggagtacatccatacgtaccggatgacgccgctgtcgctctggaatgcggcc
gcgagcgggatgcagccgcacgaggtgacagacatcctcggcgcgtacagcaaatacagc
gtgccgccaaccatcgtcaaggaaatcgacgaaacgatgcgcaaatacggtctgatccgg
ctcgaacgccgcggggacgacctcgttttacatagcgacgatccgctcgttctcacggag
cttgccggatacaagtcgatcgcggccctgctcgaagacggctacgtgctcaaaagctac
gcgcgcggcctcatcaagcaggagctgatccggttggggctgcctgtccaggatttggcg
ggctattcgcaaggcgaatcgtgcccggtcagcttgcgggcgaacagcgctgtgggaaag
ccgtttgccttgcgcccgtaccagcaggaagcggtagacgccttttaccgcggcggctcc
gctctaggcggaagcggcgtgctcgtgctgccctgtggagccgggaagaccgtcattggc
attggcgcgatttcccagttgcagactgctacgcttattttgacgacgaatacgacttcc
gtgcggcaatggatcgccgagctgctggacaaaaccgatcttgatcccgagcttgtcggc
gaatacaccggcgatcacaaggaagtaaagccgataactgtggcaacttatcaaattctc
acataccgccccacctctctggatgaatttcctcatatgaaactcttttcagagcgtgac
tgggggcttattatttacgatgaggtgcatttattgcctgcacctgtttttcgtgttact
tccgggattcaggcgacacgccgactgggcttgacggctacgctcgtcagggaagacggc
cgggaagaagacgtctttacactgatcgggccgaaaaagtacgaggttccttggaaagcg
atggaggatgcgggctggattgcggaagcccgctgccgggaaatccggctgccttttgag
ccgaagtggcgggaagcgtatgcgcatgcgacggcacggcaaaagttccggatcgccgcc
gaaaacccgaaaaagctggacgttgtcaaaaagctgctggagcgccacgaaggcgaccgg
gtgctgattatcggccagtacgtcgaccaactggaacagatggcgactgccctgcaactg
ccgctgattacgggcaaagtgccggaaaaagagcgcgagacgctgtatcaacaatttaaa
aaaggggaaatcacacgcctgatcgtctccaaggtggccaatttcgccgttgatttgccg
gacgccaatgtggcgattcaaatctcgggcacgtttggctcccgccaggaagaagcgcag
cgactgggacgaatcttgcgaccaaaaaccgaaaataacaccgctcacttttatacactg
gtgacacgcgatacgagagagcaggagttttcgctccaccgtcagctttttctcgtcgag
caaggctatccatacgaaattatagaaaacgagatgctggtctga
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