Brevibacillus agri: BA6348_12890
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Entry
BA6348_12890 CDS
T05855
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
bagr
Brevibacillus agri
Pathway
bagr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bagr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BA6348_12890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bagr03400
]
BA6348_12890
DNA repair and recombination proteins [BR:
bagr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BA6348_12890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DZR
DUF7575
Motif
Other DBs
NCBI-ProteinID:
QAV13574
LinkDB
All DBs
Position
complement(2573368..2574348)
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AA seq
326 aa
AA seq
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MHTVWKGSISFGLVNIPVRMFTATEERDIRFRQLHKECNTPIKYAKMCPHCQREVEPSEI
VRGYEYEKGHFVMINDEDLEAITPETRRAIEILDFVDLSEIDPVYFDKSYFLSPQDTGEK
AYALLRAAMEQTGKIAVAQVTMRNRQSLAVIRLYEHCIMLETIFYPDEVRPVSQVPALPE
ATVPLAENELKMATELIGNMTVPFDPAKYTDEYRVELQKMIEKKLEGQEIATAPTVARTN
VIDLMQALKESLASTAGTTGSPVKLAPELAPEPAPAAAKPKAGRKRAASAEKADKTTSPA
KEAVGKPSPGPTSTTKTLRRKKATPV
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccgtctggaaaggctcaatcagcttcggcctggtcaatatacccgtccgcatg
tttacggcaacagaggaacgggacattcgctttcgccaactgcacaaggaatgcaacacc
ccgatcaaatacgccaaaatgtgcccgcattgccagcgggaagtggaaccgagcgaaatc
gtccgcgggtacgagtacgaaaaaggccattttgtcatgattaacgacgaagacctggag
gcgatcacgcccgagacgcgccgcgccattgaaattctcgacttcgtggacttgtcggag
atcgacccggtttactttgacaaaagctacttcctgtctccgcaagatacgggagaaaag
gcgtatgcgctgctgcgcgccgccatggagcagaccggaaagatcgccgtcgcccaggtg
acgatgcgcaatcggcaaagtctcgccgtcattcggctgtacgagcattgcatcatgctg
gaaacgattttttacccggacgaggtgcgcccggtcagtcaagtgcccgccttgccggag
gctactgtcccgctcgcggaaaacgaactgaaaatggcgacagagctgatcggcaacatg
accgttccgttcgatcccgccaagtacaccgacgaataccgcgtcgagttgcaaaaaatg
atcgagaaaaagctggagggccaggagatcgccaccgctccgacggttgcgcgcacgaat
gtgatcgacctgatgcaagctttgaaggaaagcctggcctcgacagcaggcactacgggc
agtcccgtgaagcttgcgccggagcttgcgccggagcctgccccggcagccgcgaagccg
aaagcagggcgcaaacgggccgcttctgcggagaaagcggacaagacaacctcccctgcc
aaagaagcggtggggaaaccgagtcccggtccgacctcgacaacgaaaacgcttcgccgc
aaaaaagccactcctgtgtaa
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