Brevibacillus agri: BA6348_13165
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Entry
BA6348_13165 CDS
T05855
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bagr
Brevibacillus agri
Brite
KEGG Orthology (KO) [BR:
bagr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bagr03032
]
BA6348_13165
03400 DNA repair and recombination proteins [BR:
bagr03400
]
BA6348_13165
Enzymes [BR:
bagr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BA6348_13165
DNA replication proteins [BR:
bagr03032
]
Prokaryotic type
DNA Topoisomerases
BA6348_13165
DNA repair and recombination proteins [BR:
bagr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BA6348_13165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QAV13626
LinkDB
All DBs
Position
2622868..2624946
Genome browser
AA seq
692 aa
AA seq
DB search
MADTLVIVESPAKAKTIGKYLGSKYIVKASMGHVRDLPKSQMGVDVNHGFEPKYITIRGK
GDVLKGLKDAAKKVKKVYLAADPDREGEAIAWHLAQYLGLDLNQPLRVVFNEITKDAIKE
AFKHPRHINMDLVNAQQARRILDRLVGYNISPILWKKVRKGLSAGRVQSVTVKLIMDRER
EIQQFIPEEYWTIATKLASNGKEFEAKFYGYEDEKVELKSEEDVKRVLDKMKDQSFVVQK
VTKRERKRNPAPPFITSSLQQEAARKLNFRTAKTMRIAQELYEGIDVGNKEGAVGLITYM
RTDSTRVSETAQNEAKEYILEKFGADYIPAEPRVQVKKENAQDAHEAIRPTSVARTPDEI
KEFLSRDQLRLYRLIWERFLASQMSSAVLDTMSVDIDAGGVMFRATGSKVKFPGFMKVYI
EGNDDGTEEESFLPPIAEGQTLEQREITPAQHFTQPPPRYSEARLIKTLEEGGIGRPSTY
APTLETIQKRGYVALEEKRFIPTELGEIVITLIEEFFPEILNAEFTAHMESDLDEIEEGT
ANWVQILDAFYGDFAKRVAVAEEEMKEVELKDEESDETCELCGRVMVYKLGRFGKFLACS
GFPECRNTKPIVKETGVKCPQCETGHIIERKSKKSRIFYGCNRYPECDFVSWDKPIARPC
PKCASLLVEKKRKKQGVSVVCTKCDYQEEADS
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggctgatacgctcgtaatcgtagaatcccctgcgaaagcgaaaaccattggaaaatat
ctgggtagcaaatatatcgtgaaagcgtccatgggacatgtgcgcgacctcccgaaaagt
cagatgggggtagatgtcaatcatggctttgaacccaaatacataaccattcgcggcaag
ggcgatgtactcaagggcctgaaggatgccgccaaaaaagtaaagaaagtctatctggca
gccgacccggatcgcgaaggggaagcaattgcctggcatctggcccaatatctcggactc
gatttgaaccagccgcttcgcgtggtgttcaacgagattaccaaagacgcgatcaaggaa
gcgttcaagcatccgcgccatatcaacatggatttggtgaacgcccaacaggcgcggcgt
attttggaccggctggtcggctacaacatcagcccgatcctgtggaaaaaagtgcgcaaa
ggtttgagcgccggacgcgtccagtctgtcaccgtcaagctgattatggatcgggagcgc
gaaatccagcaattcattcccgaagagtactggacgattgccaccaagctcgcaagcaac
ggcaaagagtttgaggcgaagttttacggctatgaggatgaaaaagtcgagctgaagtcg
gaagaggacgtcaagcgcgtgctggacaaaatgaaggatcagtcgtttgtcgtgcaaaag
gtaacaaagcgcgagcgcaaacgcaatcctgcaccgccgtttatcaccagctctctgcaa
caggaagccgcgcgcaagctcaatttccgtaccgccaagacgatgcggatcgcccaggag
ctgtacgaggggattgacgtcggcaacaaggaaggcgcagtcggtttgattacgtatatg
cgtacagactcgacccgcgtatccgaaaccgcgcaaaatgaggcgaaagagtacatactg
gaaaaattcggcgctgactacataccggcagaacctcgtgtccaggtcaaaaaagaaaac
gctcaggacgcgcacgaggcgatccgcccaacctcggtcgcacgtacgccggatgagatc
aaggaatttttgtcgagagatcaactgcgcttgtatcgactcatttgggagcggtttctg
gcgagccagatgtcttccgctgtactcgataccatgagtgtagatattgatgcagggggc
gtcatgttccgggcgactggctcgaaagtgaagttccctggatttatgaaggtttatata
gaaggaaatgatgacggcacggaagaagagagcttcctgccgccaatcgctgaaggccag
acgctggaacagcgagaaataacgccggcgcaacattttacccagccgccgccgcgttac
tcggaggcgcgtctcatcaagacgctcgaagaaggcggcatcggccgtccctctacgtac
gctccaacgctggaaactattcagaagcgcggctatgtcgcgctggaggaaaagcggttc
atcccgacagagctgggcgaaatcgtcattacgctgatcgaggagttttttccggaaatt
ctcaacgcggagtttaccgcccatatggagtccgatctcgacgaaatcgaggaaggcaca
gcgaactgggttcaaattctcgatgcgttttacggtgactttgccaagcgagtggccgta
gcggaagaagaaatgaaggaagtcgagctgaaagacgaagagtctgacgagacttgcgag
ctgtgcggccgcgtgatggtctacaagctcgggcgcttcggcaagttcctcgcttgttcc
gggttcccggaatgccgcaacacgaaaccgatcgtcaaagaaacaggggtaaagtgcccg
caatgtgaaactggacacattatcgaacgtaaatctaagaagagccgtattttttacggc
tgcaaccgatatccggaatgcgattttgtatcgtgggacaaaccgattgcccgtccttgc
ccgaaatgcgcaagcctactcgtggagaaaaagcgcaagaagcaaggggttagcgttgtc
tgcaccaaatgcgactatcaggaagaagcagactcctga
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