Brevibacillus agri: BA6348_13625
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Entry
BA6348_13625 CDS
T05855
Name
(GenBank) ATP-dependent helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bagr
Brevibacillus agri
Pathway
bagr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bagr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BA6348_13625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bagr03019
]
BA6348_13625
03009 Ribosome biogenesis [BR:
bagr03009
]
BA6348_13625
Enzymes [BR:
bagr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BA6348_13625
Messenger RNA biogenesis [BR:
bagr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BA6348_13625
Ribosome biogenesis [BR:
bagr03009
]
Prokaryotic type
rRNA helicases
BA6348_13625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
RelE
Motif
Other DBs
NCBI-ProteinID:
QAV13715
LinkDB
All DBs
Position
2716582..2718171
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AA seq
529 aa
AA seq
DB search
MTMFSDFPLHKSILQAIHDMGFEEPSPIQAACIPKVLAGGDLIGQAQTGTGKTAAFGIPL
VEKITPANRVQAIVLTPTRELAIQVAGELLRISKYNKVRTLPIYGGQSIGHQIRALRQGV
QIVVGTPGRVMDHLRRKTLKLDHVHTLVLDEADEMLDMGFIEDIETIITHMPEERQTLLF
SATMPPEIKRLATRYMKQPQTIAVSREEVTAPLIEQVYYKVFDRNKVESLCRILDSEDVE
LGIIFCRTKRGVDELSEVLQSRGYLADGLHGDLSQAQRDKVMNAFREGSIEFLIATDVAA
RGIDVGNVSHVINYDIPQDSESYVHRIGRTGRAGRKGIAMTLVTPREVRQMMFIQKQTKA
QVLSRNVPSLEEVAERKQEQLREQLTSLLESDAIADMYQKVAETLVGQYPAEKVAAAALH
LAFHTEAGQIQETEAYNFGETGAAKGMVRFFLNVGRNANMKPQDLVREISESVGIPGKAV
GRIDIFENFTFVEVPEEVAAFVYESLRQTRINGKRINLEPAKPRGAKRS
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgttttctgattttcctttacataaatccattttgcaggcgatccacgatatg
ggcttcgaagagccatcgccgatccaggccgcttgcattccgaaagtgctggctggggga
gacctgatcggccaagcacagacgggaacgggtaagaccgcagctttcgggattccgctc
gtggagaaaattacgccagccaaccgcgtacaggctatcgtgctgactccgacgcgcgag
cttgccatccaggttgccggagagctgctgcgcatctccaaatacaacaaagtacgcacg
ctgccgatctacggcggacagtcgatcggccaccagattcgcgccctgcgccaaggcgtg
cagatcgtagtcgggacgcccggccgcgtcatggaccacctgcgccgcaaaacattgaag
ctcgatcatgtacatacgctcgttctggatgaagcggacgaaatgctggacatgggcttc
atcgaagatatcgaaacgatcatcacacatatgccggaagagcgtcagactctgcttttc
tccgcaacgatgccgcctgaaatcaagcgcctggcgacccgctacatgaagcagccgcaa
acgatcgcggtcagccgcgaagaagtgacagcgccattgatcgaacaagtgtattacaaa
gtgtttgaccggaacaaagtagagagcctgtgtcgcattctcgacagcgaggacgtggag
cttggcatcatcttctgccgcaccaagcgcggggtggatgagctgtccgaagtgctgcaa
tctcgcgggtatttggcggacggcttgcacggcgatctttcccaggcgcagcgcgacaag
gtgatgaatgccttccgcgaaggctccatcgagtttttgatcgccaccgacgtagcggcg
cgcgggatcgacgtaggaaacgtatcccacgtcatcaactacgacattccgcaagactcc
gagagctacgtgcaccggatcgggcgtacaggccgcgccggacgcaaaggaatcgccatg
actttggtgactccgcgtgaagttagacagatgatgttcatccagaagcagacaaaagca
caagtgctgtcccgcaacgttccgtcgctggaggaagtggctgagcgcaagcaggagcag
ctccgcgagcagttgaccagcctgctggaaagcgatgcgattgcggatatgtaccaaaaa
gtagcggaaacgctcgtgggccaatacccggctgagaaggttgcggctgcggcactgcac
ctggctttccataccgaagcagggcaaattcaggagaccgaagcgtacaacttcggagag
acgggtgcggcaaaaggcatggtgcgtttcttcctgaacgtaggccgcaacgcgaacatg
aagccgcaagatttggttcgcgaaatttccgagtcggtcggcatcccgggcaaagcggtg
ggccgcatcgacattttcgaaaacttcacgtttgtggaagtgccggaagaagtggcggcg
ttcgtctacgaatcgctccgccaaacccggatcaacggcaagcgcatcaacctggagccg
gcgaagccgcgcggtgcgaagcgctcctaa
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