Brevibacillus agri: BA6348_18755
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Entry
BA6348_18755 CDS
T05855
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bagr
Brevibacillus agri
Pathway
bagr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bagr00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BA6348_18755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bagr03021
]
BA6348_18755
Transcription machinery [BR:
bagr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BA6348_18755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
tify
COPI_C
Motif
Other DBs
NCBI-ProteinID:
QAV14628
LinkDB
All DBs
Position
complement(3814166..3815293)
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AA seq
375 aa
AA seq
DB search
MNKQNITSDMEAMSIEQVKEQLVELGKKRGVLSYKEITDRLAGFEQDSDQMDEFFEYLGD
QGIEINNNENDDDDEVDEMIMKDEDNEEFDFDDLSVPPGIKINDPVRMYLKEIGRVPLLS
AEEEIKLAQRIEQGDEEAKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVE
KFDYRKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQELGRE
PMPEEIAEKMDLTPEKVREIMKIAQEPVSLETPIGEEDDSHLGDFIEDQDALEPSDAAAY
ELLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRK
LRHPSRSKRLKDFLE
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcaaaatatcacttctgacatggaagcaatgtccatcgaacaagtgaaggag
cagttggtcgaattaggcaagaaacgcggcgttttgtcgtacaaggaaattacggatcgc
ctggcaggtttcgagcaggattcggatcagatggatgagtttttcgaatacctgggcgat
caaggtatcgagatcaacaacaacgagaacgacgacgacgatgaagtcgacgaaatgatt
atgaaggacgaggacaacgaagaattcgactttgacgatctctccgttccgcctggaatt
aagatcaatgaccctgtacggatgtacttgaaagaaattggtcgtgttcctctgctctcc
gctgaagaggagattaaattggcgcagcgcattgaacagggtgacgaggaagcgaaaaga
agactggctgaggccaacctgcgactggttgtttcgattgccaagcgctatgtaggccgc
ggcatgctgttcctcgacctgattcaagaagggaacatgggtctgattaaagcggtggaa
aagtttgactaccgcaaaggctacaagttcagtacgtacgcgacatggtggattcgccag
gccattacccgtgcaattgcggaccaggcgcggaccattcggattccggtgcatatggtg
gaaacgatcaacaagctgatacgcgtttccaggcagcttctccaggagctaggacgcgag
ccgatgccagaggaaatcgcggaaaaaatggatttgaccccggaaaaggttcgagaaatc
atgaagattgctcaagagcctgtttctttggagacgccaatcggggaagaagacgactct
cacttgggcgatttcatcgaggaccaggacgcgctggagccttcggatgcagcggcgtat
gagctgttgaaagagcagctcgaagacgttctggacaccttgactgatcgggaagaaaac
gttcttcgcctgcgttttggcctcgacgacggtcgcacgcgcacgttggaagaagttggc
aaagtgttcggcgtaacgcgcgagcgcattcgtcagatcgaagcaaaagcgctgcgaaaa
cttcgtcatccaagccgaagcaaacgcttaaaagatttcctggaatag
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