Brevibacillus agri: BA6348_25270
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Entry
BA6348_25270 CDS
T05855
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bagr
Brevibacillus agri
Brite
KEGG Orthology (KO) [BR:
bagr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bagr03009
]
BA6348_25270
Enzymes [BR:
bagr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BA6348_25270
Ribosome biogenesis [BR:
bagr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BA6348_25270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
Methyltransf_15
MTS
TRM5-TYW2_MTfase
PrmA
Methyltransf_11
Cons_hypoth95
Methyltransf_12
Methyltransf_32
Methyltransf_23
N6_N4_Mtase
TPMT
Motif
Other DBs
NCBI-ProteinID:
QAV15773
LinkDB
All DBs
Position
complement(5155233..5156684)
Genome browser
AA seq
483 aa
AA seq
DB search
MAKTTKKRRGPQQTAKVELDVPVRVGQTVEVEITGLNHEGAGVGRIEGYTLFVDGALAGE
RVHARVDHVKKNFGFAKLTKVVEASTYRAHPPCPLYDRCGGCSLQHLAYEEQLRHKQQIV
RDNLRRIGGFQVEGEGAITVHPTLGMSDPWRYRNKAQVPIGEENGALVGGFYAEKSHSII
DMNECLIQHQKNDEAVATVKRAAAALGIKPYDEVRGTGLLRHVVVKVGVKTGEVMVVLVT
TAEAIPQRDKLVEAIRTEVAGVASIVQNINPDKTNVIFGKKTVTLWGSDVIYDYIGPIKF
AISARSFYQVNPAQTEVLYNKTLEYAGATGTETVIDAYCGIGTISLFLAQKSKHVYGVEI
VPEAIADANRNARLNGVKNATFEAGPAEVVIPAWKEQGIRADVIVVDPPRKGCDEALLTT
ILEMQPERVVYVSCNPSTLARDLKVLAERYEVKEVQPVDMFPHTGHVECVILMNLKGCNK
QFQ
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaacaacaaaaaagcggcgcggaccgcagcagaccgccaaggtggagctggac
gtcccggtacgtgtcggccaaaccgtggaagtggagataaccggactgaaccacgagggc
gctggagtcggccggattgaaggatatacgctgttcgtagacggcgcactcgcaggcgag
cgagtccacgcgcgcgtcgaccatgtcaaaaagaacttcggcttcgccaagctgacgaaa
gtggtggaagccagcacataccgcgcgcacccaccctgtccgctgtacgaccgctgcggc
ggctgttcgctgcagcacctcgcctacgaggaacaactgcggcacaaacagcaaatcgtc
cgcgacaacctgcgccgcatcggcggctttcaggtggagggagaaggagcaatcacggtg
cacccgacgctcggcatgagcgatccatggcgctaccgcaacaaggcacaggtgccaatc
ggcgaggaaaacggcgccttggttggcggcttttacgcggaaaaatcccactccatcatc
gacatgaacgaatgcctcatccagcaccaaaagaacgacgaggcggtcgccaccgtgaag
agagccgctgctgctctcggcatcaagccgtacgacgaagtgcgcggcacaggcttgctg
cgccacgtagtcgtcaaggtgggggtaaagacgggcgaagtcatggtcgtgctcgtgacg
accgcggaggcgattccgcagcgagacaagctcgtggaagcgatccgcaccgaggtggcg
ggcgtcgctagcatcgtgcaaaacatcaacccggacaagaccaacgtcattttcggcaaa
aagactgtgacactctggggcagcgacgtcatttacgattacatcggcccgatcaaattc
gcgatctcggcgcggtcgttctaccaggtcaacccggcacagacggaagtgctgtacaac
aaaacgttggagtacgccggcgcgacagggacggaaacggtcatcgacgcctattgcggc
atcggcacgatctcgctgtttttggcgcagaagtcgaagcatgtgtacggcgtggagatc
gtcccggaagcgatcgcggatgcgaaccgcaacgcccggttgaacggcgtgaaaaacgcg
acattcgaggcaggcccggcagaggtcgtaattccggcgtggaaggagcaggggatccgc
gccgatgtgatcgtggtcgacccgccgcgcaagggctgcgatgaggcgctgttgacgaca
attttggaaatgcagccggagcgcgtggtgtacgtgtcgtgtaacccgtcgacgctggca
agggatttgaaggtattggcggagcggtatgaggtgaaggaagtgcagccggtggatatg
tttccgcatacggggcatgtggagtgtgtaatattgatgaatctaaagggttgtaacaag
caatttcagtga
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