Bacillus sp. HBCD-sjtu: CU648_19950
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Entry
CU648_19950 CDS
T11603
Name
(GenBank) 3'-5' exoribonuclease yhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
bahb Bacillus sp. HBCD-sjtu
Brite
KEGG Orthology (KO) [BR:
bahb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bahb03019
]
CU648_19950
Messenger RNA biogenesis [BR:
bahb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CU648_19950
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AUD24581
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All DBs
Position
3687026..3687970
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AA seq
314 aa
AA seq
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MKKKIAEYEVGEQVDIFLLIKTATKGIASNGKPFLTVILQDPSGDIEAKLWDVSPEVEKQ
YVAETIVKVAGDILNYKGRIQLRVKQIRVANENEVTDISDFVEKAPVKKEDMVEKITQYI
FEMRNPNIQRLTRHLLNKHQNEFLDYPAATKNHHEFVSGLAYHVVSMLDLAKAISNLYPS
LDKDLLYAGVILHDLGKVIELSGPISTTYTLEGNLLGHISIMVNEIGKAADELQIDAEEV
LILQHIVLSHHGKAEWGSPKPPLVKEAEILHYIDNLDAKMNMMDRALGRTKPGEYTERVF
ALDNRSFYKPTFHN
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaaaattgcagagtatgaagttggtgaacaagtcgatattttcttgttaatt
aaaacagcgacaaaaggtatcgcgagcaatggaaagccatttttaacagtaatcttacaa
gatccaagtggagatattgaagcgaaattgtgggacgtatcaccagaagttgagaaacaa
tatgtagcggaaacaatcgtgaaagtagctggagatattttaaactacaaaggccgtatt
caattacgtgtgaaacaaattcgtgttgcaaatgaaaatgaagtaacagatatctcagat
ttcgtagaaaaagcaccagtgaaaaaagaagatatggttgagaaaattacgcaatacata
tttgaaatgagaaacccgaacatccaacgtctaacgagacatttattaaataagcatcaa
aacgaatttttagactatccagcagcgacgaagaaccatcacgagttcgtatctggacta
gcttatcacgtcgtatcgatgcttgatttagcaaaagctatctcaaatctatatccatca
ttagataaagacttactatatgcaggcgttattttacatgaccttggtaaagtaatcgaa
ttatctggcccgatttctacaacgtatacgttagaaggaaatttactaggccacatttct
attatggtgaacgaaattggtaaagcagcagacgaattgcaaatcgatgcagaagaagta
ttaattcttcaacacatcgtcctttctcatcacggaaaagcagaatggggtagcccaaaa
ccaccattagtaaaagaagcagaaattctgcactacatcgataacttagatgcaaaaatg
aacatgatggaccgcgcattaggacgcacaaaaccaggtgaatacacagagcgtgtcttt
gcacttgataatcgttcgttctataaaccgacgttccataattaa
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