Buchnera aphidicola (Cinara tujafilina): BCTU_199
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Entry
BCTU_199 CDS
T01528
Symbol
himD
Name
(GenBank) integration host factor beta subunit
KO
K05788
integration host factor subunit beta
Organism
baj
Buchnera aphidicola (Cinara tujafilina)
Brite
KEGG Orthology (KO) [BR:
baj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
baj03032
]
BCTU_199 (himD)
03036 Chromosome and associated proteins [BR:
baj03036
]
BCTU_199 (himD)
03400 DNA repair and recombination proteins [BR:
baj03400
]
BCTU_199 (himD)
DNA replication proteins [BR:
baj03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BCTU_199 (himD)
Chromosome and associated proteins [BR:
baj03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
BCTU_199 (himD)
DNA repair and recombination proteins [BR:
baj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
BCTU_199 (himD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HTH_56
Motif
Other DBs
NCBI-ProteinID:
AEH39784
UniProt:
F7WZC2
LinkDB
All DBs
Position
complement(241621..241908)
Genome browser
AA seq
95 aa
AA seq
DB search
MNKSELFERITEKKTYIQVKIIERIIKDILEYMSFSLEKGNRIEIRGFGSFSLHYRFARV
GRNPKTGEKVNLHGKYVPHFKPGKQLRERTNCFSK
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatcagaattatttgaacgaattactgaaaaaaaaacttatattcaagtaaaa
attattgaacgtattataaaagatattttagaatatatgtctttttctttagaaaaggga
aatcgaatagaaattagaggatttggtagtttttctttacattatcgtttcgcgcgtgta
ggtagaaatccaaaaacaggagaaaaagttaatttacatggcaaatatgttcctcatttt
aaacccggaaaacaattaagagaacgtacaaattgtttttctaaatag
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