Buchnera aphidicola (Cinara tujafilina): BCTU_327
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Entry
BCTU_327 CDS
T01528
Symbol
rpoA
Name
(GenBank) RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
baj
Buchnera aphidicola (Cinara tujafilina)
Pathway
baj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
baj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BCTU_327 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baj03021
]
BCTU_327 (rpoA)
03400 DNA repair and recombination proteins [BR:
baj03400
]
BCTU_327 (rpoA)
Enzymes [BR:
baj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BCTU_327 (rpoA)
Transcription machinery [BR:
baj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BCTU_327 (rpoA)
DNA repair and recombination proteins [BR:
baj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BCTU_327 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF7219
Motif
Other DBs
NCBI-ProteinID:
AEH39892
UniProt:
F7WZM5
LinkDB
All DBs
Position
complement(384441..385430)
Genome browser
AA seq
329 aa
AA seq
DB search
MQDSVIEFLKPRLVDIQQISLTHSKIILEPLERGFGHTLGNALRRILLSSMPGCAIAEVE
INGILHEYMPKEGMKEDILEVLLNLKGLAIKLFNKDEVILFLKKTGVGPVLASDINSDAS
IEIINLNHVICNLTSPSASIEMRMKVIRGRGYVTAGSRKKLYEDNRTIGTLFLDVSYSPI
ERIIYNVEAARVAQRTDLDKLIINLETNGTINPEEAIRKSATILSEQLEAFVDLRGVREP
IIKEEKPEFEPVLLRPVDDLELTVRSANCLKTESIHYIGDLVQKMEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMKLDNWPPDTLLEN
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcaggactctgtaatagaatttttaaaaccacgtttagtagatattcaacaaattagt
ttaactcattcaaaaattattttagaaccattagaacgtggttttggtcatactttaggt
aatgctttaagaagaattttattatcatccatgccaggttgcgctatagctgaagttgaa
ataaatggtatattacatgaatatatgccaaaagaaggaatgaaagaagatattttggag
gttttgttaaatttaaaagggttagcaattaaattatttaataaagatgaggttatttta
tttttaaagaagacaggtgtgggtccagttttagcttctgatattaattctgatgcatca
atagagattattaatttaaatcatgtaatttgtaatttaactagcccctctgcatctatt
gaaatgagaatgaaagtgattcgtggtcgaggttatgttacagccggatcaagaaaaaaa
ctttatgaagataatagaacaatcggaactttgtttttagatgtttcttatagtcctatt
gaacgaattatttataatgtagaagcagcacgtgttgcacaacgtacagatttagataaa
cttattattaatttagaaactaacggaaccattaatcctgaagaagcaattcgaaaatct
gctacgattttatcagaacaattggaagcatttgtagatcttagaggggttcgagaaccg
attattaaagaagaaaaaccggaatttgagcctgttttattgcgtcctgttgatgattta
gaattaacagtaagatctgctaattgcttaaaaactgaaagtattcattatattggtgat
ttagtgcagaaaatggaagtagagttattaaaaactccaaatttaggaaaaaaatcttta
actgagataaaagatgtattagcttctcgaggtttatctttaggtatgaaattagataat
tggcctcccgatactttattagaaaattaa
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