Buchnera aphidicola (Cinara tujafilina): BCTU_392
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Entry
BCTU_392 CDS
T01528
Symbol
rho
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
baj
Buchnera aphidicola (Cinara tujafilina)
Pathway
baj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
baj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCTU_392 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baj03021
]
BCTU_392 (rho)
03019 Messenger RNA biogenesis [BR:
baj03019
]
BCTU_392 (rho)
Transcription machinery [BR:
baj03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BCTU_392 (rho)
Messenger RNA biogenesis [BR:
baj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BCTU_392 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
DnaB_C
Motif
Other DBs
NCBI-ProteinID:
AEH39948
UniProt:
F7WZS2
LinkDB
All DBs
Position
complement(430114..431373)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTALKNKSVSKLIFLGESIGLENLARMRKQDIIFSILKQHSKSGEDIFGDGVLEILQD
GFGFLRSSDSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDRPENARNKILFENLTPLHANSRLKMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPECVLMVLLIDERPEEVTEMQRLVNGEVIASTFDEPAARHV
QVSEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKILTGGVDANALHRPKRF
FGAARNVKEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELPLSRKIAEKRVFPAIDY
NRSGTRREELLTIPEELQKMWILRKIIHPMSEIDAMEFLINKLSMTKTNDEFFEMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttacggcattaaaaaataaatcagtttctaaacttatttttcttggtgaaagc
attggacttgaaaatttagctcgtatgcggaaacaagatattattttttctattcttaaa
caacattcaaaaagtggagaagatatatttggtgatggtgtattagaaatattacaagac
ggttttggttttttacggtcttccgatagttcttatttagcgggtcctgatgatatttat
gtatcacctagtcaaattcgtcgttttaatttaagaactggtgatactatttctggaaaa
attcgtcctccaaaggagggagaacgatattttgcattattaaaagtaaatgaagttaat
tatgatcgtcctgaaaatgcaagaaataaaattttatttgaaaatttaacaccattacat
gctaattctagattaaaaatggaaagaggtaatggttcaacagaagatttaacagcaaga
gttcttgatttagcttctccgattggtagaggacaaagagggttaattgtagcaccacca
aaggctggtaaaacaatgttattacaaaatattgcgcaaagtattgcatataaccaccct
gaatgtgtgttgatggtgttattgattgatgaacgtccagaagaagtcacggaaatgcag
agattagttaatggagaagttattgcatctacatttgatgaacccgccgcaagacatgta
caggtatctgaaatggttatagaaaaagcaaaacgattagtagaacataagaaggatgta
attattcttttagattctattacgcgattagcacgtgcatataatacagttgttccggct
tccggaaaaatattaacagggggagttgatgctaatgctttacatagaccgaagagattt
tttggggccgctcgaaacgtaaaagaaggtggtagtttaacgattatagcaactgcttta
attgataccgggtctaaaatggatgaagtaatttatgaagaatttaaagggacagggaat
atggagttaccattatctcgaaagatagcggaaaaacgagtttttccagccattgattat
aatcgttcaggtacaagacgagaagagttattaactattccagaagaattacaaaaaatg
tggattttaagaaaaattattcatcctatgagtgaaattgatgctatggaatttttaatt
aataagttatctatgacaaaaactaatgatgaattttttgaaatgatgaagagatcatga
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