Buchnera aphidicola JF99 (Acyrthosiphon pisum): CWS_01385
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Entry
CWS_01385 CDS
T02354
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
bajc
Buchnera aphidicola JF99 (Acyrthosiphon pisum)
Brite
KEGG Orthology (KO) [BR:
bajc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bajc03016
]
CWS_01385
Enzymes [BR:
bajc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CWS_01385
Transfer RNA biogenesis [BR:
bajc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CWS_01385
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1
OB_RNR_1st
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
ADP67240
LinkDB
All DBs
Position
292613..294562
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AA seq
649 aa
AA seq
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MFQNNPLLTQLKKNLHAKSPRVEGIVKSTERGFGFLEVDPQKSYFIPPKNMKNVMHGDKI
IALLTIEKDREIVEPEKLIEPFLNRFVGKIEKKDNRLFIVPDYPFLKDLITCQPNKNCIN
IFQNGDWAVAQLKKHKLKGDHLFYAELTEKITQEDDPLIPWWVTLARHNLDRKEPLAEED
DLILKESDNRKDLTDLDFITIDNTNTKDIDDALFVSEKNNGDISLIVAIADPTAYIKHGS
KLDVIASKRIFTNYLPGFNIPMLPRNLSEDICSLNPNKRRPVLACHITVLKNGNISNKIE
FFLAWIKSKSKLSYDHVSDWIEKIGSWIPPTKSIANQILILHRLCLLRIKWRKKNAVLFK
DSIEYRFHVSEHGKIIDVLIEKRRIAHKIIEESMIVANISAANFLSKNIGFGIYNVHSGF
DLVNAENAVSFLRSYNLNFTVKEITTLKGFCNLRRVLNIISNNYIDSRIRRFQSFGDFST
IPGPHFALGFSEYATWTSPIRKYSDMINHRLLKSIIKKEKSIKPGEDIKIKISEQRRRNR
MAERDVSDWLYTIFLQKKKYQNQKFNAEITDISRSGIRARLIENGANVFIPGTLIHPIRE
ELNFNQESGKVFINGIMHYKISDLIQVTLSDIRLKTRSIIAKPVFEKFK
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaaataatccattacttacacagttaaaaaaaaacctacatgctaaatcacca
cgtgttgaaggcatagtaaaaagcactgaaagaggatttggatttttagaagttgatccg
caaaaaagttattttatacctccaaaaaatatgaaaaatgttatgcatggagataaaata
attgcattattaacaatagaaaaagatcgagaaatagttgaacctgaaaaattaattgaa
ccttttctaaatagatttgttggaaaaatagagaaaaaagacaatcgcttatttattgtt
ccagattatccgtttttaaaagatcttataacatgtcaacctaataaaaattgtatcaat
atttttcaaaacggagattgggctgtagctcaattaaaaaaacataaactcaaaggagat
catcttttttatgctgagttaactgaaaaaattactcaagaagatgatccattaatacca
tggtgggtaactctagcacgtcacaatcttgacaggaaagaacctttagcagaagaagat
gatcttatattaaaagaaagcgataatagaaaagatttaacagatttagattttattact
atcgataatacaaatacaaaagatattgatgatgctctttttgtaagtgaaaaaaataat
ggagatatttctttaattgtcgctattgcagatccaaccgcttatattaaacatggtagt
aaattagatgttatagcatctaaaagaatatttacaaattatttaccaggttttaacatt
cctatgttaccccgtaatttatcagaagatatatgttcattaaatcctaacaaacgtcgc
cctgtattggcatgtcatattacggttttaaaaaatggaaacatctctaataaaattgag
ttttttttagcctggattaaatcaaaatcaaaattatcttacgatcatgtttcagattgg
attgaaaaaatagggtcatggataccaccaacaaaatctattgcaaatcaaatattaatt
ttacatcgtctgtgtttattacgtataaaatggcgcaaaaaaaatgcagtgttatttaag
gatagcatagaatatcgcttccatgtatcagaacatggaaaaatcatagatgtgttaatt
gaaaaaaggcgtattgctcataaaattattgaagaatctatgatagtagcaaatatatct
gctgctaattttttatctaaaaatattggttttggtatatataatgttcattctggtttt
gatcttgttaatgctgaaaatgcagtatcctttttgagaagttacaatttaaactttact
gtgaaagaaataactacattgaaaggtttttgtaatctaagacgtgtattgaatattata
tctaataattacatcgatagtcgtatccgtcgttttcaatcttttggagatttcagtact
ataccaggaccacattttgcacttggtttttcagaatatgcaacctggacttctcctatt
cgtaaatatagtgatatgattaatcatcgtttattaaaatctattataaaaaaagaaaag
tcaattaaacctggtgaagatattaaaataaaaataagtgaacaaagacgacgtaataga
atggctgaaagagatgtttcagattggctttatactatatttttacagaaaaaaaaatat
caaaaccaaaaatttaacgcggaaataactgatatttctaggagtggaataagagccaga
ttaatagaaaatggtgctaatgtttttattcctggaactttaatacatcctattagagaa
gaattaaattttaatcaagaatcaggaaaagtttttattaatggtattatgcattataaa
atatctgatttgattcaagtcactttatcagatattcgtttgaaaactcgtagtattatt
gccaaacctgtatttgaaaaatttaaataa
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