Buchnera aphidicola JF99 (Acyrthosiphon pisum): CWS_01970
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Entry
CWS_01970 CDS
T02354
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bajc
Buchnera aphidicola JF99 (Acyrthosiphon pisum)
Brite
KEGG Orthology (KO) [BR:
bajc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bajc03016
]
CWS_01970 (truB)
Enzymes [BR:
bajc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CWS_01970 (truB)
Transfer RNA biogenesis [BR:
bajc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CWS_01970 (truB)
Prokaryotic type
CWS_01970 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ADP67351
LinkDB
All DBs
Position
complement(415235..416173)
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AA seq
312 aa
AA seq
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MFFHEKRDVHGLLLLDKPQGISSNNALQKVKMLFSAKKAGYIGTLDPLATGMLPICFGEC
SKFSHYLMESNKKYHVIAKLGEKTSTSDSDGIIIKKRPILINSFKIKSALKELTGLIEQI
PPMYSAIKHNGVPLYKYARQGLNIKRSIRKVLIHDISSIHQEKNLIEFKIFCSKGTYVRT
LVEDLGEKLGCGAHVIFLRRLEMASYLHSQLVTISYLHKLLRKEKNNNFNFFEKIDNLLM
PIDSPVSFLPKVYLLPQQSYNFQLGQTVIFFSDIKNSLVRVIALENNKFIGLGRIDTEEL
LIPYRLVSRSIN
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgttttttcatgaaaaacgcgatgttcatggattacttttactagataaaccacaggga
atatcttctaataatgccttacaaaaagttaagatgctttttagtgcaaaaaaagcaggt
tatattggtactctagatccgttagcaacaggtatgctaccaatttgttttggagaatgt
tcaaaattttctcattatttaatggaatctaataaaaaatatcatgttattgctaaatta
ggggaaaaaacatctacatctgattctgatggaattatcataaaaaaacgccctatttta
attaattcttttaaaataaaatctgctctcaaggagttaactggtttgattgaacaaatt
cctccaatgtattctgcaatcaaacataatggtgtgcccttgtataaatatgcacgtcaa
ggattaaatattaagcgtagtataagaaaagttcttatacatgatataagttctattcat
caagaaaaaaacttaatcgaatttaaaatattttgttcaaaaggaacatatgttcgcaca
ttagtggaggatttaggggaaaaattaggttgtggagctcatgtgatttttttacgtcgt
ttagaaatggcttcatatcttcatagtcaactagtcacaatttcatatttacataaatta
ttaagaaaagaaaaaaacaataattttaatttcttcgaaaaaatagataatttattaatg
cctatagatagccctgtatcttttttacctaaagtatatcttcttcctcaacaatcatat
aattttcaattaggacaaactgtaatttttttttctgacatcaaaaatagtctagtacgt
gtaatagcattagaaaataataaatttattggattaggaagaattgatacagaagaatta
ttgattccatatagattagtttctagatctattaattaa
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