Buchnera aphidicola JF99 (Acyrthosiphon pisum): CWS_02860
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Entry
CWS_02860 CDS
T02354
Symbol
sbcB
Name
(GenBank) exonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
bajc
Buchnera aphidicola JF99 (Acyrthosiphon pisum)
Pathway
bajc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bajc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CWS_02860 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bajc03400
]
CWS_02860 (sbcB)
Enzymes [BR:
bajc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
CWS_02860 (sbcB)
DNA repair and recombination proteins [BR:
bajc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CWS_02860 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CWS_02860 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CWS_02860 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ADP67520
LinkDB
All DBs
Position
complement(591054..592571)
Genome browser
AA seq
505 aa
AA seq
DB search
MLRNPFYQLNLFSKDSIFYLIILLKFKMIQFQKKPPTFLFYDYETFGIHTALDKPAQFAC
IRTDINLNIIDDPQYFYCFPSDDYLPDPGSVLITHITPQYTEKNGTNEYNFSQKIYDILM
QSNTCVVGYNNINFDDEITRNIFYRNFFDPYEWSWKNGNSRWDILNLLRACYALRPTGIN
WPKNELGLTSFKLSDLTKTNNIVHLNAHNAVSDVYATIEIAKLVKKKQPRLFDFFFKIRK
KNELYKLIDLRNFQPIIYISAYFGAIYHNMSCILPIAWHENNSNILIAIDLFKDIKTLIN
MCKKICFDSIFIKNLLDSGVVLLHLNRCPILAPIQVIRKEDYNRLNFHRFSLNKKIELIK
KNMFFIQNIKIIFSKNNNTNQFFNVDLEIYNGFFNSKDKKKIQIIRNTDPVFLKHIFCNF
HDSRLKNLFFRYRARNFFYTLDDNEKKIWLKHCMNVLNPVSFQEYKNNIQFLLKKYSNNT
EKVVLLKQLSDFSFQKYKKLFFEKY
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgttgagaaaccctttttatcaattgaatttattttctaaggattcaatattttattta
attattttattgaaatttaaaatgatacaattccaaaaaaaaccacctacttttttattt
tatgattatgaaacttttgggatacatacagctttagataaacccgctcaatttgcatgt
atcagaacagacataaatttaaatataatagatgatccgcagtatttttactgttttccg
tcagatgattatttacctgaccccggttctgttttaattactcatatcacccctcaatat
acagaaaaaaatggaactaatgaatataatttttctcaaaaaatatatgatattttaatg
caatcgaatacttgtgttgttggttataataatattaattttgatgatgaaattacaaga
aatatattttatcgaaatttttttgacccttatgaatggagttggaaaaacggaaattct
cgttgggatatattgaatttattacgagcttgttatgcgctcagacccactggtataaac
tggcctaaaaacgaattaggattaacaagttttaaactatcagatttaacaaagacaaac
aatattgttcatttaaatgcacataatgctgtttcagatgtttatgcgactattgaaata
gcaaagcttgtcaagaaaaaacaacctagactttttgactttttttttaaaataagaaaa
aaaaatgaattatataaattaattgatttaaggaattttcaaccaataatttatatttcc
gcttattttggcgctatctatcataatatgagttgtatacttcctatagcatggcatgaa
aacaatagtaatatattaatcgctattgatttatttaaagatattaaaacactaataaat
atgtgcaaaaaaatatgttttgatagtatttttatcaaaaatttactcgattcaggggta
gtattattgcacttaaatcgttgtcctattttggctccaattcaagtaattagaaaagaa
gattataatcgattgaactttcatagattttcattaaataaaaagattgaattaattaaa
aaaaatatgttttttattcaaaatataaagattattttctctaaaaataataatactaat
caattttttaatgttgatttagaaatatataatggtttttttaattcaaaagataaaaaa
aaaatacaaatcatcagaaatactgatccagtttttttaaaacatattttttgtaatttt
catgattctcgtttaaaaaatttatttttccgttatcgtgctcgtaattttttttataca
ttagatgataatgaaaaaaaaatatggttaaaacattgtatgaatgttttaaatccagtt
tcttttcaagaatataaaaacaatattcaatttctattaaaaaaatattctaataataca
gaaaaagtagtgttattaaaacaattatcagatttttcttttcaaaagtataaaaaattg
ttttttgaaaaatattaa
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