Buchnera aphidicola Ak (Acyrthosiphon kondoi): BAKON_033
Help
Entry
BAKON_033 CDS
T01825
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bak
Buchnera aphidicola Ak (Acyrthosiphon kondoi)
Pathway
bak03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bak00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BAKON_033 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bak03021
]
BAKON_033 (rpoC)
03400 DNA repair and recombination proteins [BR:
bak03400
]
BAKON_033 (rpoC)
Enzymes [BR:
bak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BAKON_033 (rpoC)
Transcription machinery [BR:
bak03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BAKON_033 (rpoC)
DNA repair and recombination proteins [BR:
bak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BAKON_033 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AEO08405
UniProt:
G2LMB7
LinkDB
All DBs
Position
complement(36312..40535)
Genome browser
AA seq
1407 aa
AA seq
DB search
MKDLLKFLKSQTKNEDFDAIKISLASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQSKVRRERMGHIELSSPTAHIWFLKSL
PSRIGLLLDMPLRDIERVLYFESYVVVETGMTNLEKRQILTEEQYLDSLEEFGDEFHATM
GAEAIQFLLKDINLVQECNTLRIELNETNSETKRKKLTKRIKLLESFIQSHNKPEWMILN
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY
LHLHQCGLPKKMALELFKPFIYGKLEVRGLATTIKAAKKMVEREEAVVWDILDEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLESQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTREKINGKGEGMLLDGSNEAEKVYRLG
IAELHALVKVRIIEYKKNKDNSFTAIKKIIPTTVGRAILWMIIPKGLPFSIVNQTLGKKD
ISKMLNTCYRILGLKPTVFFADQIMYTGFAYAARSGASVGIDDMVIPEKKANIINEAEIE
VAEIQEQFQSGLVTAGERYNKVIDIWAAANERVAKAMMENLSTESVTNKKGQIQKQISFN
SIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVITQDDCRTHEGILMTPLIEGGDVKEPLRERVL
GRVTAENVFIPNTKNILIKRNTLLNEQWCDLLEYNSIDNVKVRSVVNCDTDFGVCAYCYG
RDLARGNLVNKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNQGIINL
NNAKSVTNSTGKIVITSRNVELNIIDNFGRTKESYKVPYGAIMAKGNGEKVNAGETVAKW
DPHTMPVITEVNGLVRFVDMIDGQSITRQADELTGLSSIVILDTAERMSIGKDLRPALKI
VDSNGKDVLISGTDMPAQYFLPGKAIVQLDDGVQISSGDTLARVPQESGGTKDITGGLPR
VADLFEARRPKELAILAEISGIISFGKETKGKRRLVITPVDGSDSYEEMIPKWRQLNVFE
GERVERGDVVSDGPESPHDILRLRGVQAVTRYIVNEVQEVYRLQGVKINDKHIEVIIRQM
LRKATIVRSGDSDFLDGEQVEFSRIKISNRILDKKKKKKATFSRDLLGITKASLATESFI
SAASFQETTRVLTESAVAGKKDELRGLKENVIVGRLIPAGTGYAYHKERLNRRQKKHNNS
TVSSSQISAEEASASLSELLNSALIEK
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagatttactaaaatttctaaaatcccaaactaaaaatgaagattttgatgctatt
aaaatctctttagcttcacctgatatgattagatcttggtcatttggcgaggttaaaaaa
cctgaaactattaattatcgtacatttaagcctgaacgagatgggttattttgtgcccgt
atttttggtccagtaaaagattatgaatgtttatgtggtaaatataaaagattaaaacat
cgaggtgtaatttgtgaaaaatgtggtgttgaagtaacacaaagcaaagttcgacgcgaa
cgaatgggtcatatagaactttcttcacctacagctcatatttggtttttaaaatcttta
ccatcacgaataggtttgttgttagatatgcctttaagagatattgaaagagtattatat
tttgaatcttatgttgttgtagaaacaggaatgactaatcttgaaaaacgtcaaatttta
actgaagaacagtatctagattcattagaagaatttggagatgaattccacgctacaatg
ggagcagaagctattcaatttcttttaaaagatattaatttagtacaagaatgtaataca
ttaagaatagaattaaatgaaaccaactctgaaacaaaaagaaaaaaactaacaaaacga
attaaattattagaatctttcattcaatctcataacaaacctgagtggatgattctcaat
gtattaccagtattaccacctgatttaagaccattagtaccattagatggaggcagattt
gcaacatcagatttaaatgatttatatcgtcgggtaattaatagaaataatcgtcttaaa
cgtttattagatttagcagctcctgacataattgtacgtaatgagaaaagaatgttgcaa
gaagcagtagatgctttattagataatggtagaagagggagagctattactggatcaaat
aaaagacctctgaagtcattggcagatatgattaaaggaaaacaaggacgatttcgacaa
aatcttcttggaaaacgagtagattattctggtcgttcagtgattactgtaggtccttat
cttcatttgcatcaatgtggtttgccaaaaaaaatggcattagaactttttaaaccattc
atatatggaaaattagaagttcgcggtctagcaactactattaaagcagcaaaaaaaatg
gtagaaagagaagaagcggtagtatgggatattttagatgaagtaattcgtgaacatcca
gttcttttaaatcgtgcacctactttacatagattaggcatacaagcatttgaacctgtt
cttatagaaggaaaagcaattcaacttcatccattagtatgtgcggcttacaatgctgat
tttgatggagatcaaatggcagtccatgttccattaactctagaatcacagttagaagct
agagctttaatgatgtcaactaataatattttatcgccagctaatggagaaccaattatc
gtaccttctcaagatgtcgttttaggtctgtattatatgactcgcgaaaaaattaatgga
aagggagaaggtatgttattagatggttctaatgaagcagaaaaagtctatcgtttaggt
attgctgaattgcatgcattagtgaaagtaagaataatagaatataaaaaaaataaagat
aacagttttactgcgataaaaaaaataattcctactactgtaggccgagcaattttatgg
atgattattcctaaaggacttccttttagtattgttaatcaaactttaggaaaaaaagac
atttctaaaatgcttaatacttgttatcgtattttaggacttaaacctaccgtttttttt
gctgatcaaattatgtatactggttttgcttatgcagcaagatcaggagcctcagtcggt
attgatgatatggtaataccagaaaaaaaagcaaatattatcaatgaagcagaaattgaa
gttgctgagatacaggaacaatttcaatctggattagtcacagcaggtgaaagatataat
aaagttattgacatttgggcagccgctaatgaacgagtagcaaaagctatgatggaaaac
ttatctacagaatctgttacaaacaaaaaaggtcaaatacaaaaacaaatatcttttaat
agtatattcatgatggctgattcaggagcacgtggttctgctgcacaaattcgtcaacta
gctggtatgagaggattaatggcaaaacctgatggttctattattgaaacaccaatcaca
gctaattttcgagaaggtttaaatgtattacaatattttatttctactcatggtgcacga
aaaggattagcagatacagctctaaaaacagctaattctggatatttaacacgtcgtcta
gtagatgtagcacaagatttagttataacacaagatgattgtcgaacacatgaaggtatt
ttaatgactccattaattgaaggaggcgatgtaaaagaaccattacgtgaacgcgtttta
ggtcgtgtcaccgcagaaaacgttttcattccaaataccaaaaatatattaattaaaagg
aatacactattaaatgagcaatggtgtgatcttttagaatataattctatagataatgta
aaagtaagatcagtagtcaattgtgatactgattttggtgtttgcgcttattgttatggt
agggatttagcccggggaaatttagttaataaaggagaagcaattggagttattgcggct
caatctataggagaaccaggcacacagctaacgatgagaaccttccatattggaggtgca
gcatcaagagctgcagcagaatctagtattcaagtaaaaaaccaaggtattataaacctt
aataacgcaaaatctgtcactaattctactggaaaaatagttattacttcaagaaatgta
gaacttaatattattgataattttggcagaacaaaagaaagctataaagttccttatgga
gccattatggctaaaggaaatggtgaaaaagtaaatgctggagaaactgttgcaaaatgg
gatccacataccatgccagttattactgaagtaaatggtttagttcgtttcgtagatatg
attgacggtcaaagtattacaagacaagcagatgaattaacaggattgtcttctatagtg
atattagatacagcagaaagaatgtccattggaaaagatttaagaccagcattaaaaatt
gttgattctaatggaaaagatgttcttatttcaggaacagatatgcctgcacaatatttt
ttacccgggaaagcaattgttcaacttgatgatggagttcaaatcagttctggtgacaca
ttagcacgagttccacaagaatctggaggaactaaagatataactggtggactaccaaga
gttgcagatttatttgaagctagacgtccaaaagaactagcaattttagctgaaattagt
ggaattatatcttttggaaaagaaactaaaggaaaaagaagattagttattacaccagtg
gatggaagtgattcttatgaagaaatgatcccaaagtggagacaattaaacgtatttgaa
ggtgaaagagtcgaaagaggtgatgtcgtatctgatggaccagaatcaccacatgatatc
cttcgattaagaggggtacaagctgtgacaaggtatatcgtaaacgaagtacaagaagta
tatcgtctacaaggtgttaaaattaatgataaacatattgaagtaatcatcagacaaatg
ttacgaaaagccactatagttagatcaggagattctgattttttagacggtgagcaagtt
gaattttctcgtataaaaatttcaaatcgcatattagataagaaaaagaaaaaaaaagct
actttttcaagagatttattaggaatcactaaagcatcacttgcaacagaatcttttata
tctgctgcttcttttcaagaaacaacaagagtattaactgaatctgcagtcgcaggaaaa
aaagatgaattaagaggattgaaagaaaatgtaattgttggacgtttaattcctgcagga
acaggatatgcatatcataaagaacgcttaaatcgtcgtcaaaaaaaacataacaattca
acagttagcagttcccaaattagtgccgaagaagcctctgctagtctttcagaattatta
aattctgctctgatagaaaaataa
DBGET
integrated database retrieval system
