Buchnera aphidicola Ak (Acyrthosiphon kondoi): BAKON_375
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Entry
BAKON_375 CDS
T01825
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bak
Buchnera aphidicola Ak (Acyrthosiphon kondoi)
Pathway
bak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BAKON_375 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bak03019
]
BAKON_375 (deaD)
03009 Ribosome biogenesis [BR:
bak03009
]
BAKON_375 (deaD)
Enzymes [BR:
bak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BAKON_375 (deaD)
Messenger RNA biogenesis [BR:
bak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BAKON_375 (deaD)
Ribosome biogenesis [BR:
bak03009
]
Prokaryotic type
rRNA helicases
BAKON_375 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
Terminase_6N
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEO08718
UniProt:
G2LN80
LinkDB
All DBs
Position
complement(410261..412063)
Genome browser
AA seq
600 aa
AA seq
DB search
MTHIESTFSFLGLNPFIIQSLNEMGYVKPSPIQASCIPLLLEGRDVLGMAQTGSGKTAAF
SLPLLHNLNINLKAPQILVLAPTRELAVQVAEAFSDFSKYMIGIHVLPLYGGQRYELQLR
ALRQGPQIVVGTPGRLLDHLKRGTLNLSNLHGLVLDEADEMLRMGFIEDVETIMAQIPKE
HQTALFSATMPEAIRRISKRFMKNPQEIKIQSNITTRPDIKQSYWMVYGRKTDALIRFLE
VEDFSATIIFVRTKNATLEVSEALERNGYNSAALNGDMNQALREQTLERLKNGRLDILIA
TDVAARGLDVDRISFVINYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIE
RTIKQSIPEVQLPKIELLCQRRLEQFAKKVQQQLESRDLDEYSALLDKLYSTDDLDIKTL
AAALLKMAQGERSLIIKPDLIKHQPRDLSFKDNRRREDIRNIRTRRERRDNKDIDLYRIE
VGRNDGVEVRHIVGAIANEGNMHSRNIGNIKLFSSYSTIELPKGISKDLLQSFIRTRILN
KPINMKLLRDSRNYETKTLNRSTFNRDKNSNRRISENSLNKSHTSKKNELKPSFSRRRNV
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgactcatattgaaagcacattttcttttcttggtttaaatccttttattattcaatct
ttaaatgaaatgggatatgttaaaccttctcctattcaagcatcttgtattcccttactt
ttagaaggacgtgatgtattaggaatggcacaaactgggagtggtaaaacagctgctttt
tctttaccactattacataatcttaacattaatttgaaagctcctcaaatattggtatta
gctcctacaagagaattagcggttcaagtagctgaagcgttttcagatttttctaaatat
atgattggaatacatgtattacccttatatggcggtcaaagatatgaacttcaattgcgt
gcattgcgacaaggacctcaaattgttgtaggaactccaggtcggttattagatcatcta
aaaagagggacacttaatctatccaatttacatggattagttttagatgaagcagatgaa
atgttacgaatgggatttatagaagatgtcgaaacaatcatggcacaaattcctaaagaa
catcaaactgcattgttttcagctacaatgccagaagcaattcgtcgtatttctaaacga
ttcatgaaaaatccacaagagataaaaatacagtctaatataacgacacgtccagatatt
aaacaaagttattggatggtttatggtcggaaaactgatgcattaattcgttttttagaa
gtggaagatttttctgcgacaattatttttgttagaactaaaaatgcaactttagaagtt
tctgaagcattagagcgtaatggatataatagcgcagcattaaatggagatatgaatcaa
gcattacgagaacaaactttagaaagattaaaaaatggtagattagatattttaattgct
acagatgttgcagcacgtggtttagatgttgatcgtattagtttcgttattaattatgat
attcctatggattcagaatcttatgttcatcgtataggtcgaacaggtcgggcaggtcgg
gcaggtcgggcattattatttgttgaaaatcgtgaacgtcgtttattacgaaatatagag
cgtactatcaaacagtctattccagaagttcaattgcctaaaatagaattattatgtcaa
agacgtcttgaacaattcgcaaaaaaagtacaacaacagttagaaagtcgagatttagat
gaatatagtgctttattagataaattatattctacagatgatttagatataaaaacttta
gcagctgctctattaaaaatggctcaaggtgaacgctctttaattattaaaccagattta
ataaaacatcaacctcgagatttatcatttaaagataatcgtcgacgtgaagatattcga
aatatccggacacgtcgtgaacgtcgtgataacaaagatattgatttatatcgtattgag
gtgggtcgtaatgatggagttgaagtgcgtcatatagttggagcaattgctaacgaagga
aatatgcatagtcgtaatatcggtaatattaaacttttttcttcttattctacaattgaa
ttacctaaaggaatatctaaagatttattacaaagctttattcgtactagaattttaaat
aaaccaattaatatgaaattattaagagattcaagaaattatgagactaagacattgaat
cgatctacgtttaatagagataaaaatagcaatcgtcgtatttctgaaaatagtttaaat
aaatcgcatacgtctaaaaaaaatgaacttaaaccgtctttttcccgtcgtagaaatgtt
taa
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