Buchnera aphidicola Ak (Acyrthosiphon kondoi): BAKON_376
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Entry
BAKON_376 CDS
T01825
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bak
Buchnera aphidicola Ak (Acyrthosiphon kondoi)
Pathway
bak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BAKON_376 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bak03019
]
BAKON_376 (pnp)
03016 Transfer RNA biogenesis [BR:
bak03016
]
BAKON_376 (pnp)
Enzymes [BR:
bak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BAKON_376 (pnp)
Messenger RNA biogenesis [BR:
bak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BAKON_376 (pnp)
Transfer RNA biogenesis [BR:
bak03016
]
Prokaryotic type
tRNA degradation factors
BAKON_376 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
KH_2
OB_RRP5_4th
KH_SLS1_2
S1_2
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
AEO08719
UniProt:
G2LN81
LinkDB
All DBs
Position
complement(412438..414561)
Genome browser
AA seq
707 aa
AA seq
DB search
MLNPIVRKFQYGQHTITLETGVMARQATAAIMASMDDTAVFVTVVGQKKIHGGQKFFPLT
INYQERTYAAGRIPGGFFRREGRPSENEILTARLIDRPIRPLFPKNFLNEIQIIATVVSV
NPQINPDIISIIGASAALSLSGIPFYGPVGAARVGYINNQYMLNPISDDMKNSSLDLVVS
GTQNAILMVEAESKILSEEQILGAIIFGHQQQQVVINNIRSLSNEASKLPWVISYPETNK
TLESKIINLSEKDISNAYFIFNKQERIEKLNNIKENIIKLFLEENSNIDILEIEDIFQAI
EKKIVRERILSHQIRIDGREKDMIRALDIRTGILPRTHGSALFTRGETQSLVSVTLGTSR
DAQNLDELLGDRIDNFLFHYNFPPYSVGEIGMVGSPKRREIGHGRLAKRSLLAVMPTLDN
FPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPIKSAVAGIAMGLVKEGNKYVLLSD
ILGDEDHLGDMDFKVSGTEEGITALQMDMKIEGITNEIIHAALNEARLARLHILNVMNQA
LNKSRSEISEFAPRIHTIKINPEKIKDVIGKGGSVIRMLTEETGTIIEIEDDGTVKISST
IEEKAKNAIRRIEEITAEIEVGRIYSGKVTRIVDFGAFVSIGLGKEGLVHISQISDKRVD
KVSNHLKIDQMISVKVLEIDRQGRLRLSIKEIESSIISNKSINNTII
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatccaattgtacgtaaatttcaatatgggcaacatacaatcactttagaaacg
ggtgtaatggctcgacaggctacggctgctattatggctagtatggatgatactgctgtc
tttgtaactgttgttggacaaaaaaaaatacatggaggacagaaattctttccacttact
attaattatcaagaacgaacatatgcagcaggtcgtatacctggtggtttttttagaaga
gaaggtcggccaagtgaaaatgaaatattaacagctcgattaatcgatagacctattcga
ccattatttccaaaaaattttcttaatgaaattcaaataattgctacagtcgtatcagtt
aatccacagattaatcctgatataatttctattataggtgcatctgctgcacttagttta
tcaggaattccattttatggtccagtaggtgctgctagagtgggttatattaacaatcaa
tatatgttaaatcccattagtgatgacatgaaaaatagttctttagatctcgtagtttca
ggaacacaaaatgctattcttatggtagaagcagagtctaaaatactaagtgaagaacaa
attcttggagctataatatttggtcatcaacaacaacaagtagtaattaacaatattcgt
tctttatcaaatgaagccagtaagttaccttgggtaatatcttatccagaaacaaataaa
acattggaatcaaaaataattaatttgtctgaaaaagatataagtaacgcttattttatt
tttaataaacaggagagaattgaaaaattaaataatattaaagaaaacattatcaaatta
tttttagaagaaaattcaaatatagatatattagaaatagaagatatttttcaagcgatt
gaaaaaaaaattgtgcgtgaacgtatattaagccatcaaatacgtattgatggacgtgaa
aaagatatgattcgtgctttagatattcgcactggtattttacctcgaacacatggttct
gctttgtttacccgaggcgaaactcagtctttagtttctgtaacattaggaacatctcga
gatgcacaaaacttagatgaattgttaggagatagaatagacaattttttatttcattat
aattttccaccttattctgttggggaaataggaatggttggatcaccgaaaagacgagaa
ataggtcatggtcgtcttgctaaaagaagtcttttagcagtaatgcctacattagataat
tttccttatactattcgagtagtatctgaaattactgaatctaatggttcttcttctatg
gcttctgtttgtggtgcttctttagccttaatggatgccggagtacctattaaatctgct
gttgctggaatagcaatgggtttggttaaagaaggaaataaatacgtcttgctttcagat
attttaggtgatgaagatcatttaggcgatatggattttaaagtttctggtacagaagaa
ggaattacagctttgcagatggatatgaaaatagaaggtattaccaatgaaattatacat
gcagctttaaatgaggcaagattagctagattgcatattttaaatgtaatgaaccaagca
ttaaataaatctagaagcgaaatttctgaatttgcgcctcgtattcataccataaaaata
aatcctgaaaaaattaaagatgttataggtaaaggaggttctgttattcgtatgctaact
gaagaaactggaactataattgaaattgaagatgatggaacagtaaaaatatcatctact
attgaagaaaaagcaaagaatgccattcgtagaattgaagaaattacagccgaaattgaa
gtaggtcgtatttattctggaaaagttactcgtattgtcgattttggtgcttttgtctca
attggtttaggtaaagaaggcttagtgcatatttcgcaaatttctgataaaagagtagat
aaagtatctaatcatttaaaaattgatcaaatgatatctgtaaaagtcttggaaatagat
cgtcaaggtcgtttaagattaagtattaaagaaatagaaagttctattatttctaataaa
tcaataaacaataccattatctga
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