Buchnera aphidicola Ak (Acyrthosiphon kondoi): BAKON_504
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Entry
BAKON_504 CDS
T01825
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bak
Buchnera aphidicola Ak (Acyrthosiphon kondoi)
Pathway
bak03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bak00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BAKON_504 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bak03021
]
BAKON_504 (rpoA)
03400 DNA repair and recombination proteins [BR:
bak03400
]
BAKON_504 (rpoA)
Enzymes [BR:
bak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BAKON_504 (rpoA)
Transcription machinery [BR:
bak03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BAKON_504 (rpoA)
DNA repair and recombination proteins [BR:
bak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BAKON_504 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AEO08831
UniProt:
G2LNJ3
LinkDB
All DBs
Position
complement(547940..548929)
Genome browser
AA seq
329 aa
AA seq
DB search
MQNSIMDFLKPRLVDIEQISATHTKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVKVYGKDEAFLTLNKSGIGCVTAADIMHDGD
VEIIKPEHVICHLTYENASIKMRIKVQRGRGYISASSRVHLEEDSRPIGCLLVDACYSPI
DRISYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVREP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDILASRNLSLGMRLENWPPSSVLDE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagaactctatcatggattttttaaaaccgcgtttagttgatattgaacaaattagc
gcaactcatactaaagtaactttagagccactagaaagaggattcggtcatactcttgga
aatgcacttcgtagaattcttttgtcttctatgcctggatgtgctgtaactgaagttgag
attgatggggtacttcatgagtatagcactaaagagggtgtacaagaagacattttagaa
attttattaaatttaaaaggattagctgtaaaagtatatggaaaagatgaggcctttctt
acattaaataaatctggaattggttgtgttactgctgcagatattatgcatgatggtgac
gttgagattattaaaccagaacatgtaatttgtcatttaacttatgaaaacgcttctatt
aaaatgcgaataaaagtgcaacgtggacgaggttatatttctgcatcttcaagagttcat
ttggaagaagattcacgaccaataggttgtttattagtagatgcttgttatagtccaata
gatcgcatttcttacaatgtcgaagccgcacgtgtagaacaaagaactgatttagataag
ttagttattgaaatggaaacaaatggaaccattgatccagaagaagcaattcgacgagct
gctactattttggcagaacaattagaagcttttgttgatttaagagatgttcgcgaacct
gaagttaaagaagaaaaacctgaatttgatcccattttattacgtccagtagatgattta
gaactaacagttcgttctgctaattgtcttaaagcagaagctatacattatattggtgac
ttggtacaaagaactgaagttgaacttttaaaaactcctaatttaggcaaaaaatcttta
actgaaatcaaagacatcttagcttctagaaatttatctcttggtatgagattagaaaat
tggccaccatcaagtgttttagatgaataa
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