Buchnera aphidicola Ak (Acyrthosiphon kondoi): BAKON_604
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Entry
BAKON_604 CDS
T01825
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bak
Buchnera aphidicola Ak (Acyrthosiphon kondoi)
Pathway
bak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BAKON_604 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bak03021
]
BAKON_604 (rho)
03019 Messenger RNA biogenesis [BR:
bak03019
]
BAKON_604 (rho)
Transcription machinery [BR:
bak03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BAKON_604 (rho)
Messenger RNA biogenesis [BR:
bak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BAKON_604 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_25
AAA_22
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AEO08921
UniProt:
G2LM74
LinkDB
All DBs
Position
complement(627385..628644)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTALKNMPVSELIILGEKMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTIAGKIRPPKEGERYFALLKVNEVN
YDKPENARSKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTILLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELPLSRKIAEKRVFPAIDY
NRSGTRKEELLTLPDELQKMWILRKIIHPMSEIDAMEFLLNKLSMTKTNDEFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgcacttaaaaatatgccagtttctgaactaattattcttggtgaaaaa
atggggttggaaaatttagcgcgtatgcgtaaacaagatattatttttgccatccttaaa
caacatgcaaaaagtggagaagatatttttggagacggtgttttagaaatattacaagat
ggatttggttttctacgttctgcagatagttcttatttagctggtcctgatgatatttat
gtttctcctagtcaaattcgtagatttaatctacgcactggtgatactatcgctgggaaa
attagacctcctaaagaaggagaaagatattttgctctacttaaagtaaatgaagttaat
tatgataaacctgaaaatgcaagaagcaaaatattatttgaaaacctaacaccattgcat
gctaactccagattacgaatggaacgtggaaatggatctactgaagatttaacagcaaga
gtattagatttagcatcacccattggacgaggacaacgaggcttaattgtagctccacca
aaagctggaaaaacaatattacttcaaaatatagcacaaagtattgcttataatcatccc
gattgtgttttaatggtcttattaattgatgaaagaccagaagaagtaactgaaatgcaa
agattagtaaaaggtgaagtcgttgcatctacttttgatgaacctgcatcaagacatgtt
caagttgctgaaatggttattgaaaaagcaaaaagattagtagaacacaaaaaagatgta
attattttacttgattctattactcgtttagcaagagcttataatactgtagtaccagca
tctggaaaggttttgacagggggggttgatgccaatgctctacacagacctaaaagattt
ttcggggctgcacgcaatgtagaagaaggaggaagtttaacgattattgcaactgcacta
gtcgatactggctctaaaatggacgaagtaatttatgaagaatttaaaggaacaggtaac
atggagctgccattatcaagaaaaattgcagaaaaacgtgtctttccagctatcgattat
aatcgatctggaactagaaaagaagaattattaactttgccagatgaactgcaaaaaatg
tggattttaagaaagattattcatcctatgagtgaaatagatgcaatggaatttttatta
aacaaactttctatgacgaaaacaaacgatgaattttttgatatgatgaaacgttcgtaa
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