Bacillus sp. KICET-3: R5H20_16350
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Entry
R5H20_16350 CDS
T11722
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bakc Bacillus sp. KICET-3
Pathway
bakc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bakc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
R5H20_16350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bakc03400
]
R5H20_16350
Enzymes [BR:
bakc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
R5H20_16350
DNA repair and recombination proteins [BR:
bakc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
R5H20_16350
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
UvrD-helicase
HHH_5
AAA_12
AAA_16
UvrD_C
T2SSE
nSTAND3
DUF4926
AAA
DISC1_C
NPHP3_N
TsaE
Rad17
NTPase_1
AAA_28
AAA_17
AAA_5
AAA_18
AAA_29
Motif
Other DBs
NCBI-ProteinID:
WOV63112
LinkDB
All DBs
Position
complement(3205018..3207384)
Genome browser
AA seq
788 aa
AA seq
DB search
MEEASFLKGTVTAVIYHNETNLYTVLKVKVQETSESFDEKTVSVTGYFPAIFEDETYTFY
GKTASHPKFGLQFQADHFKKEVPTTKEGVIQYLSSDLFEGIGKKTAEEIVKKLGEGAINK
ILGDASVLYDVPKLSKKKADKLAALLQQHQGLEQIMISLSEFGFGPQLSMKIYQVYESET
LDKIRENPYQLVKDVEGIGFIKADELGGRMGISGRHAERIKAAILYTVEATCLQEGHTYI
ETKQLIIETQKLLNQSSDEEKVTEMDVADAIISLGEQKDLFIEDDRCYYPSLYYAEQSFA
KRVQTIAEQTEYDDQFPESEFLLALGELEERMQVQYAPSQKEAIQKALMSPMLLLTGGPG
TGKTTVIRGIVELYSELHGLSLNPADYKKDETFPFVLAAPTGRAAKRMSESTGLPAVTIH
RLLGWNGAEGFTHDEDNPIDGRLLIVDETSMLDIWLANQLFKAIPNRIQVIMVGDEDQLP
SVGPGQVLRDLLASNLIPSVRLTDIYRQAEGSSIVELAHDMKKGRLPENLTAPTKDRSFI
RCRQQQIKEVVEKVVKNALQKGYSARDIQVLAPMYRGPAGINELNALLQDILNPPKPKGR
ELKYGDVVYRTGDKVLQLVNQPEHHVFNGDMGEIVSIFYAKENTEKEDMAVVSFDGNEIT
ITKKDFNQFTHAYCCSIHKSQGSEFPIVILPVVKSYYRMLRRNLLYTAITRSKKFLILCG
EEEALEWGIKNRESSERQTSLQRRLHQAVHEEDEELLALQKELPFSVYDANIGMEGITPF
DFMEKEAE
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagcatcctttctgaaaggaacggtaacggccgtcatctatcataatgaaaca
aacctctataccgtactgaaagtgaaggttcaggaaacatctgaatcatttgatgaaaaa
accgtttctgtcacagggtactttccggcaatctttgaagatgaaacgtatactttctac
ggaaaaaccgcctcccatccgaagtttggcctgcaatttcaagcagatcattttaaaaaa
gaagttccgacgacaaaagaaggcgtcatccaatatttgtcgagcgacctatttgaaggc
atcggcaaaaaaacggcggaagaaatcgtcaaaaagctcggggaaggcgcgatcaacaag
attttgggagacgcttccgtgctttatgatgtgccaaagctttcaaagaaaaaagcggat
aagcttgccgctcttcttcagcagcatcaggggcttgagcagatcatgatttccttgagc
gagtttggcttcgggccgcagctgtccatgaaaatttatcaagtatatgaatcggaaacg
ctggataaaatccgtgaaaatccgtatcagctcgtcaaggatgtcgaaggaatcggcttt
attaaagcggatgaactcggcggcagaatggggatttccggcaggcatgcggaacggatc
aaagcggcgattttatatacggttgaagcgacatgccttcaggaagggcatacttacata
gaaacaaaacagctcattatcgagacgcagaagctgctgaaccagtcgtctgacgaagaa
aaagtcacggaaatggatgtggcggatgcgatcatttccctaggtgaacagaaagatctg
tttattgaagacgacaggtgctattatccgtcgctttactatgctgaacaaagctttgcc
aaaagagtccagacgatcgcggaacaaaccgaatacgatgaccagtttcccgaatcggaa
tttttgcttgctttaggcgagcttgaagaacgaatgcaagtccaatacgcgccaagccaa
aaagaagccattcaaaaagcgctgatgtccccgatgctgcttttgaccggaggacccggc
acgggaaaaacgacagtcatcaggggaatcgtcgaattgtacagcgagctgcacggttta
agtttaaatccggctgattataaaaaggatgaaacctttccgtttgtactggctgcgccg
acgggtagagcggccaagcggatgagcgaatcgacgggtcttcccgctgtgacgatccac
aggctcctcggctggaacggagcggaaggttttacacatgacgaagataacccgatcgat
gggcggctgctgattgtcgatgagacgagcatgcttgatatatggcttgccaaccaatta
ttcaaagcgattccaaaccggattcaggttatcatggtgggagatgaagaccagctcccg
tctgtcggaccgggacaggtgctcagggatctccttgcatcaaatctcattccctcggtc
agattaaccgatatttaccggcaggcagaaggctcttcaatcgtggaattggcgcatgat
atgaaaaaggggaggctgccggaaaatttgacggccccgactaaagaccgctcatttatc
cgctgccgtcagcagcaaattaaagaagtggttgaaaaagtcgtcaaaaacgcattgcaa
aagggctattccgcccgggacattcaagtgcttgccccgatgtacaggggtccggcggga
atcaatgaattaaatgcgcttttgcaggacatcctcaatccgccaaaaccaaaaggcagg
gagctaaagtacggggatgtcgtctacaggacgggcgacaaggtgctccagcttgtcaat
cagcctgagcatcatgtgttcaacggtgatatgggcgaaattgtttctattttttacgcg
aaggaaaatacggaaaaagaagacatggctgtcgtttcttttgacggcaacgagatcaca
attacaaaaaaagatttcaatcagtttacacatgcttactgctgttcgattcacaaatcg
cagggcagcgaatttccgattgtcattcttcccgtcgtcaaaagctattaccggatgctg
agaagaaatttgctttatacggccattacaagaagcaaaaaatttctcattttgtgcggt
gaagaggaagcgcttgaatggggcataaaaaatagagaatcctctgaaaggcagacatct
ttgcagagaaggctgcatcaggcggtacatgaagaggacgaggagctgctggcgctccaa
aaagaactgcctttcagcgtgtatgacgccaacatcggtatggaaggcatcacacctttt
gactttatggaaaaagaggcggaataa
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