Baekduia alba: DSM104299_00318
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Entry
DSM104299_00318 CDS
T09120
Symbol
rlmCD
Name
(GenBank) 23S rRNA (uracil-C(5))-methyltransferase RlmCD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bala
Baekduia alba
Brite
KEGG Orthology (KO) [BR:
bala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bala03009
]
DSM104299_00318 (rlmCD)
Enzymes [BR:
bala01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
DSM104299_00318 (rlmCD)
Ribosome biogenesis [BR:
bala03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DSM104299_00318 (rlmCD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
MTS
Methyltransf_15
Methyltransf_25
Cons_hypoth95
DUF5894
UPF0020
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
WCB91645
LinkDB
All DBs
Position
327312..328724
Genome browser
AA seq
470 aa
AA seq
DB search
MTSDVPTTDGAPVAASARPPRPQRGDELELHIESLAFGGAGVARWGDAEHGWVVFVREAL
PGDTVRAAVTKRKRHYGEARLIEVVTPSPDRVEPKADHPGAPWQVLPYEKQLEIKAQQVE
DALRRLGHLDGFEMLPIVGAVEQWRYRNKLEFSFGTDRETRELICGFHAPGSWEDIVHVE
DCLLQSERGNQARRDVLAWAREHGYSAYDRRTQIGALRNLVIREGRRTGELQVRLVVSDG
VEVEAGSLHAAVAADSLLVTEIETVGETTAGGTTSLVAGEPTIAEEVSGLRFRLSGQAFF
QTNTEMAEKLYAAAADVAGLQGWERVYDLFCGIGTIGLSLASRSGEVWGLEIVEDAIADA
IGNAKANDISNARFFAGDVRLALRELVEKAGRPDVVVVDPPRAGLSQKVVRRVLEASPKR
IVYVSCNPTTLAPNAAQMVEAGYVLKTVQPVDMFPQTPHIECVALLERGE
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
gtgacctccgacgtccccaccaccgacggcgcccccgtggccgcctccgcccgcccgccg
cgccctcagcgaggcgacgagctcgagctccacatcgagtcgctcgcgttcggcggcgcg
ggcgtcgcgcgctggggcgacgccgagcacggctgggtcgtcttcgtgcgcgaggcgctg
cccggcgacaccgtgcgcgccgccgtcaccaagcgcaagcgccactacggcgaggcgcgg
ctgatcgaggtcgtgacgccgtcgcccgaccgcgtcgagcccaaggccgaccacccgggc
gcgccgtggcaggtgctgccctacgagaagcagctggagatcaaggcccagcaggtcgag
gacgcgctgcgccggctcgggcacctcgacggcttcgagatgctcccgatcgtcggcgcc
gtcgagcagtggcgctaccgcaacaagctcgagttctcgttcgggaccgatcgcgagact
cgcgagctgatctgcggcttccacgcgccgggctcgtgggaggacatcgtgcacgtcgag
gactgcctgctgcagagcgagcgcggcaaccaggcgcgccgcgacgtcctggcgtgggcg
cgcgagcacggctacagcgcctatgaccggcgcacgcagatcggcgcgctgcgcaacctc
gtgatccgcgagggccggcgcaccggcgagctgcaggtgcggctggtcgtcagcgacggc
gtcgaggtcgaggcgggctcgctgcacgccgcggtcgccgccgactcgctgctggtcacc
gagatcgagacggtcggcgagacgaccgcgggcggcacgacgtcgctggtcgccggcgag
ccgacgatcgccgaggaggtctccggcctgcggttccggctcagcggccaggcgttcttc
cagaccaacaccgagatggccgagaagctgtacgcggccgcggccgacgtcgcgggcctc
cagggctgggagcgcgtgtacgacctgttctgcggcatcggcacgatcggcctgtcgctc
gcgtcgcgctccggcgaggtctggggcctggagatcgtcgaggacgcgatcgccgacgcg
atcggcaacgccaaggccaacgacatctccaacgcacgcttcttcgccggcgacgtccgc
ctcgcgctgcgcgagctggtcgagaaggccggccgaccggacgtcgtggtcgtcgacccg
ccgcgcgccggcctgtcgcagaaggtcgtgcgccgcgtgctcgaggcctcgcccaagcgc
atcgtctacgtctcctgcaacccgacgaccctggcgccgaacgcggcccagatggtcgag
gccggctacgtgctgaagacggtccagccggtcgacatgttcccgcagaccccgcacatc
gagtgcgtggcgctgctggaacgcggcgagtag
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