Baekduia alba: DSM104299_00382
Help
Entry
DSM104299_00382 CDS
T09120
Name
(GenBank) hypothetical protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bala
Baekduia alba
Pathway
bala03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bala00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DSM104299_00382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bala03019
]
DSM104299_00382
03400 DNA repair and recombination proteins [BR:
bala03400
]
DSM104299_00382
Enzymes [BR:
bala01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DSM104299_00382
Messenger RNA biogenesis [BR:
bala03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DSM104299_00382
DNA repair and recombination proteins [BR:
bala03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DSM104299_00382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
WCB91709
LinkDB
All DBs
Position
395031..396869
Genome browser
AA seq
612 aa
AA seq
DB search
MDLRAALQDHFGFADFRPGQQAAVEAAVAGQDTLVVMPTGAGKSLCYQLPALVREDLTIV
VSPLVSLMQDQVEALERRAPGAAGLINSQQDASSNADVLARARSGALKLLYVAPERFSSP
GFLEAIREVPIGLFVVDEAHCVSQWGHDFRPDYFRLADAARWLGAKALVASTATATTEVA
RDIVARLGLREPAIVTTGFDRPNLSFAVVPCATTADKHARIAAALREEGATPAIVYAGTR
KACDALAERLGVDLGVEVLAYHAGLGRAERTAVQRRFMSGGADVVVATNAFGMGVDKADV
RTVAHEVVPPSVEAYYQEAGRAGRDGAPARALLFAEKRDKSLHVFFIQRSEVSDGLLDQV
AARLVEAAVEGRFDVSLSYLDDEAERVRAIVGHLARAGVIQPAPSPMDRVRGRVVGAYDG
RARALARSSAAEGQRARWKQYRSVWAFVEDDGCRRARVLRHFGDPAAPAPMAGVPCCDVC
DPSLVPAAPTRALAGGAAGASPRAGTAKHESIDQAILSVVRAAKPSIGRTRVAEVLRGGQ
AKALLRNGWDGLPEYATYAHLAGTTVLSRIDAMVDEGVLDKTEGPRPVLRPGAAAPPPAA
PDGQGSLSFEAA
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggatctgcgcgccgccctccaagaccacttcggcttcgccgacttccgccccggccag
caggccgcggtggaggcggcggtcgccgggcaggacacgctcgtcgtgatgcccacaggc
gcgggcaagtcgctctgctaccagctgcccgcgctcgtgcgggaggacctcacgatcgtc
gtctcgccgctggtctcgctgatgcaggaccaggtcgaagcgctggagcggcgcgctcct
ggtgctgcagggctcatcaactcccagcaggacgcgtcgagcaacgccgacgtcctcgcg
cgcgcccgctcgggcgcgttgaagctgctgtacgtggcgccggagcggttctcgtcgccc
gggttcctggaagcgatccgggaggtcccgatcggcctgttcgtggtcgacgaggcgcac
tgcgtgtcgcagtgggggcacgacttccggcccgactacttccggctggccgacgcggcg
cggtggctgggcgccaaggcgctggtcgcctcgacggcgacggcgacgaccgaggtcgcg
cgggacatcgtcgcgcggctggggctgcgcgagcccgcgatcgtgacgacgggcttcgac
cgcccgaacctgagcttcgccgtcgtgccgtgcgcgacgaccgccgacaagcacgcgcgg
atcgccgcggcgctgcgcgaagagggcgcgacgccggcgatcgtctacgcgggcacgcgc
aaggcgtgcgacgcgctggccgagcggctgggcgtcgacctcggcgtcgaggtgctcgcc
taccacgcggggctgggtcgggccgagcgcacggcggtgcaacggcggttcatgtccggc
ggcgccgacgtcgtggtcgccacgaacgcgttcggcatgggcgtcgacaaggccgacgtc
cggacggtcgcgcacgaggtcgtgccgccgtcggtcgaggcctattaccaggaggccggg
cgcgcggggcgcgacggcgcgccggcgcgggcgctgctgttcgccgagaagcgcgacaag
tcgctgcacgtgttcttcatccagcggtcggaggtctccgacggcctgctcgaccaggtc
gccgcgcggctggtggaggcggcggtcgaggggcgcttcgacgtctcgctgtcctacctg
gacgacgaggctgagcgcgtgcgcgcgatcgtcggccatctcgcccgggcgggcgtgatc
cagccggcgccgtcgccgatggaccgcgtgcgcggccgggtcgtcggcgcctacgacggc
cgggcgcgcgcgctggcgcggtcctcggcggccgaggggcagcgggcgcggtggaagcag
taccgctcggtgtgggcgttcgtcgaggacgacggctgccgccgggcacgggtgctgcgg
cacttcggcgatccggccgcgccggcgccgatggcgggcgtcccgtgctgcgacgtgtgt
gacccgtcgctggtgccggcggcgccgacgcgggcgctggcgggtggcgccgcgggcgcg
tcgccgcgggccgggaccgcgaagcacgagtccatcgaccaggcgatcctgtcggtcgtg
cgcgcggcgaagccgtcgatcggccgcacgcgcgtcgccgaggtgctgcgcggcgggcag
gcgaaggcgctgctgcgcaacggctgggacggcctgccggagtacgcgacctacgcgcac
ctggccggcacgacggtcctgagccggatcgacgcgatggtcgacgaaggggtgctggac
aagaccgagggtccgcgcccggtcctgcggccgggcgcggcggcgccgccgccggcggcg
cccgacgggcagggctcgctgtcgttcgaggcggcgtga
DBGET
integrated database retrieval system
