Baekduia alba: DSM104299_01684
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Entry
DSM104299_01684 CDS
T09120
Symbol
recB
Name
(GenBank) RecBCD enzyme subunit RecB
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
bala
Baekduia alba
Pathway
bala03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bala00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DSM104299_01684 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bala03400
]
DSM104299_01684 (recB)
Enzymes [BR:
bala01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DSM104299_01684 (recB)
DNA repair and recombination proteins [BR:
bala03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DSM104299_01684 (recB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PDDEXK_1
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
WCB92983
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All DBs
Position
1692292..1695666
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AA seq
1124 aa
AA seq
DB search
MSDFDVCGPLPTGVTVLEASAGTGKTYTIAALATRYVAEGTRLDELLLVTFTRLATGELR
DRVRQRLSGARAALDLALAADPLSVAIPAGDPLLALLATGPRAVVEARRDRLAVAIADFD
AATITTTHGFCQEVLLGLGVAGDIDPGHRFSEDARDLVDEVVHDLYVNRFNATAPPAGLD
REEAREVVQAAIGNPSAPLAPIAYDAPDGAVALRHGLAVAARDELDRRKRALALMTFDDL
VTRLRATLEGPSGDAVAAALRNRYKIALVDEFQDTDPDQWTIMRRAFAHPGSTLVLIGDP
KQAVYAFRGADVYAYLDAAASADARPTLGMNWRTDRGLLHAYDVLFDHARLGHEDITYRQ
TSASPTHQDTRLSGAPVGTPLRIRVAARHDPDVEQTKQGWSKAPAARQHVAKDCAADVAR
LLASGATASGAPLNAGDVAVLVRTNAQARTIKAALDDAGVPAVVNGAGSVFATDAARDWL
ALLEALERPEYLPRARAAALTAFLAWPAERVAGADDAAWDALQQQLHAWAGLLRRTGVAT
LMEDITQREGLPARLLGQLGGERTLTDLRHVGELLHGAAIDGRLGITALAALLRHRMAAD
DREAGAEDRARRLESDAAAVQVLTVHRSKGLEFGIVYCPFLWDPFRGRDKGVPAIYHDPE
RGNQRTIDVSLDPHDVAYERHAAQAAAELAGEELRLAYVALTRAKYQAVVWWATSYYCRE
SPLARLVLERDFAGAVPEAGGTGADAVAADAAARFRALRDLAPKCIALERSLVERAPDGA
GAGDGAVALAAAVFDRGLDARWRRLSYSAITAGAYEARVASEVEEAVGADDAADERPLAA
AARADDGALSSVPSLLGSMPAGTRIGTLVHQVLEDTDFAAADLGAELGGRLAAARRRRTL
DVGDPVVLVDGLRAAIETPLGPLVGDARLRDLVRGDRLDELTFEVPLVGGDAPDGELTLA
AIAGVLRELVVGDDPLAGYADRLLDPMLKANLRGYLTGTIDLVARAGGGFAIMDYKTNRL
AAAGEELTAWHHRPAALVEEMQRSHYALQALLYAVALHRYLRWRLPGYDPARDRPAVLYL
FLRGMVGPDTPRGVDGSPCGVFAWRPPVGLLPALSDVLDRGVDR
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacttcgacgtctgcgggccgctcccgaccggcgtcacggtcctggaggccagc
gccggaaccggcaagacctacaccatcgccgcgctggcgacgcgctacgtcgccgagggc
acgcgcctggacgagctgctgctggtcacgttcacacggctggcgaccggcgagctgcgc
gaccgcgtccgccagcggctgtccggcgcccgcgcggcgctcgacctcgccctggcggcc
gatccgctgagcgtcgcgatcccggccggcgacccgctgctcgcgctgctggcgaccggg
ccgcgcgcggtggtcgaggcgcgccgcgaccggctcgcggtggcgatcgccgacttcgac
gccgccacgatcaccaccacgcacgggttctgccaggaggtgctgctcgggctcggcgtg
gccggcgacatcgatcccggccaccgcttcagcgaggacgcgcgtgacctcgtcgacgag
gtcgtccacgacctgtacgtcaaccgcttcaacgcgacggcgccgccggccgggctcgat
cgcgaggaggcgcgcgaggtcgtgcaggcggcgatcggcaacccgagcgcgccgctggcg
ccgatcgcctacgacgcgcccgacggcgcggtcgcgctgcgccacgggctggccgtcgcg
gcgcgcgacgagctggaccggcgcaagcgcgcgctcgcgttgatgacgttcgacgacctc
gtcacgcgcctgcgcgcgacgctcgaggggccgtcgggcgacgcggtcgcggccgcgctg
cgcaaccgctacaagatcgcgctggtcgacgagttccaggacaccgatcccgaccagtgg
acgatcatgcggcgcgcgttcgcgcatcccgggtccacgttggtgttgatcggcgacccc
aagcaggcggtgtacgcgttccgcggcgccgacgtgtacgcctacctcgacgcggccgcg
tcggccgacgcgcgcccgacgctgggcatgaactggcgcaccgaccgcgggctgctgcac
gcctacgacgtgctcttcgaccacgcgcggctcggccacgaggacatcacctaccgccag
acgagcgcgtcgccgacgcaccaggacacgcggttgagcggcgcgccggtgggcacgccg
ctgcggatccgggtcgccgcgcgccacgacccggacgtcgagcagacgaagcagggctgg
tccaaggcgccggcggcgcgccagcacgtggcgaaggactgcgcggcggacgtcgcacgg
ctgctggcgtcgggggcgacggcctccggcgcgccgctgaacgccggcgacgtcgccgtg
ctcgtccggaccaacgcccaagcgcgcacgatcaaggcggcgctggacgacgcgggcgtg
ccggcggtcgtcaacggggcgggcagcgtcttcgcgaccgacgcggcgcgtgactggctg
gcgttgttggaggccttggagcggccggagtacctcccgcgcgcacgggccgcggcgctg
accgcgttcctggcgtggccggcggagcgcgtggcgggcgcggacgacgcggcgtgggac
gcgctccagcagcagctgcacgcctgggcggggctgctgcggcggaccggcgtcgcgacg
ttgatggaggacatcacgcagcgtgaggggctgccggcgcggttgttggggcagttgggt
ggcgagcgcacgctcacggatctgcgccacgtcggcgagctcctgcacggggcggcgatc
gacgggcggctcgggatcacggcgctggccgcgttgctgcgccatcgcatggcggccgac
gaccgcgaggccggcgccgaggaccgcgcgcggcggctggagtccgacgcggcggccgtc
caggtcctgaccgtccaccggagcaagggcctggagttcgggatcgtctactgcccgttc
ctgtgggacccgttccgcgggcgcgacaagggcgtgccggcgatctaccacgaccccgag
cgcggcaaccagcggacgatcgacgtgtcgctggacccgcacgacgtggcctacgagcgc
cacgccgcgcaggccgcggccgagctggcgggcgaggagctgcggctggcctacgtcgcg
ctgacgcgggcgaagtaccaggcggtcgtgtggtgggcgacgtcgtactactgccgggag
tcgccgctggcgcgcctggtgctggagcgcgacttcgccggcgcggtgccggaggcgggc
gggaccggcgccgacgcggtggccgccgacgcggcggcgcgcttccgggcgctgcgcgat
ctggcgccgaagtgcatcgccttggagcgctcgctggtcgagcgcgcgccggacggcgcc
ggcgccggcgacggcgcggtcgcgttggcggccgcggtcttcgatcgcgggcttgacgcg
cgctggcggcgcctgtcctacagcgcgatcaccgcgggcgcgtacgaggcgcgcgtggcg
agcgaggtcgaggaggccgtgggggccgacgacgccgccgacgagcggcccctggcggcg
gcggcgcgcgcggacgacggcgcgctgtcgtcggtcccgtcgttgttggggtccatgccc
gccgggacgcggatcggcacgctcgtgcaccaggtgctcgaggacaccgacttcgcggcc
gccgacctcggcgccgagctgggcgggcgcctcgccgccgcgcgccggcggcggacgctg
gacgtcggcgatccggtcgtcctggtcgacgggctgcgggcggccatcgagacgccgctc
gggccgctggtcggcgacgcccgcctgcgcgacctcgtgcgcggcgaccggctcgacgag
ctgacgttcgaggtgccgctcgtcggcggcgacgcgccggacggcgagctgacgctggcg
gcgatcgccggcgtgctgcgcgagctcgtggtcggcgacgacccgctcgcgggctacgcc
gaccggctgctcgaccccatgttgaaggccaacctgcgcggctatctgaccgggacgatc
gacctcgtcgcgcgcgccggcggcggcttcgcgatcatggactacaagaccaaccggctg
gcggcggcgggcgaggagctgaccgcgtggcaccatcgcccggccgcgctggtcgaggag
atgcagcgctcgcactacgcgctccaggcgttgttgtacgccgtggcgctgcaccggtac
ctgcgctggcggctgccgggctacgacccggcgcgcgaccggccggccgtgttgtacttg
ttcttgcgcgggatggtcgggccggacacgccgcgcggcgtggacgggtctccgtgcggc
gtcttcgcctggcggccgccggtcgggctgctgccggcgctgagcgacgtgctggatcgc
ggggtggaccggtga
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