Baekduia alba: DSM104299_01934
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Entry
DSM104299_01934 CDS
T09120
Name
(GenBank) DNA polymerase exonuclease subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bala
Baekduia alba
Pathway
bala03030
DNA replication
bala03430
Mismatch repair
bala03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bala00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DSM104299_01934
03430 Mismatch repair
DSM104299_01934
03440 Homologous recombination
DSM104299_01934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bala03032
]
DSM104299_01934
03400 DNA repair and recombination proteins [BR:
bala03400
]
DSM104299_01934
Enzymes [BR:
bala01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DSM104299_01934
DNA replication proteins [BR:
bala03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DSM104299_01934
DNA repair and recombination proteins [BR:
bala03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DSM104299_01934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
UVR
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WCB93227
LinkDB
All DBs
Position
1946286..1948046
Genome browser
AA seq
586 aa
AA seq
DB search
MHAVRRREYKHTFAMAVDVDVPSTILDHPLATAEFLVVDTETNGLGGEQCELTEIGAVLV
GGGELHERWETLVQVRAPLSRGIQRFTGISQTMVDEAPPAEVSLPELADQLDGRVLVAHN
AAFDRRVLAQAFARAGVAWPDPPVLCTVALARQLHPLARQRKLKLLAESLGIDVEVSHRA
LADAETCARVFCALFPRLCANAGSVGQALALLKSRRRRAARGGRTDGGGSGAMLGVRRRK
VDCSALPAEPGVYIFRNPEGQPLYVGKSVDIRARAKAHFRPSSPDGAWVAQAEIVDHVET
HSEVGALLTEHRLIKALRPPGNERMKHDDRWVYLRCRLDIAYPVLEIGVEPAPGLAVNVG
PLQGRFAAAELVEQLTSLFALRHCGRGMKRREFPSAYGQMGRCLSPCLGDLDPNAYRRRL
DEALALFSGEGDGGKALLRHLDDEMRRAAAEERFERAGWLQRRRARLAVLLERLGGTPSA
THTRPRLVLASHPEAARFDALWLVGGRIAHWAPLTDDLPAWTVTEPLLPATRPSAAPPTA
TPDESAQMRIATTWLASHPSLELRLTPETTRARVERFVGRALTAAA
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
gtgcacgccgtccgaaggcgggagtacaaacacacgttcgccatggcagttgacgtcgac
gttccctccacgatcctggaccacccgctcgccaccgccgagttcctggtggtggacacc
gagaccaacgggctcggcggcgagcagtgcgagctgaccgagatcggcgcggtgctcgtc
ggcggcggcgagctgcacgagcggtgggagacgctggtccaggtccgcgcgccgctctcg
cgcgggatccagcggttcaccgggatctcgcagacgatggtcgacgaggcaccgccggcc
gaggtctcgctgcccgagctcgccgaccagctcgacgggcgggtgctcgtcgcccacaac
gccgcgttcgaccggcgcgtgctggcgcaggcgttcgcgcgcgcgggcgtcgcgtggccg
gacccgccggtgctgtgcacggtcgcgctcgcgcgccagctgcatccgctggcgcgccag
cgcaagctcaagctgctggccgagtcgctggggatcgacgtcgaggtgtcgcaccgcgcg
ctggccgacgcggagacgtgcgcgcgcgtgttctgcgcgctgttcccgcggctgtgcgcc
aacgccgggagcgtggggcaggcgctggcgctgctgaagtcgcgccggcggcgagccgcg
cgcggcggccggaccgacggcggcggcagcggggcgatgctcggcgtccgccgccgcaag
gtcgactgctcggcgctgccggccgagcccggcgtctacatcttccgcaaccccgagggc
cagccgctgtacgtgggcaagtcggtggacatccgcgcgcgcgccaaggcgcacttccgg
ccctcgtcgccggacggcgcgtgggtcgcccaggcggagatcgtcgaccacgtcgagacg
cactccgaggtcggcgcgctgctgaccgagcaccggctgatcaaggcgctgcgcccgccg
ggcaacgagcggatgaagcacgacgaccgttgggtctacctgcgctgccggctggacatc
gcctatccggtgctggagatcggcgtggagccggcgccggggctggcggtcaacgtcggg
ccgctgcaggggcgcttcgcggcggccgagctggtcgagcagctcacctcgctgttcgcc
ctgcgccactgcggccgggggatgaagcgccgcgagttcccgtccgcctacggccagatg
gggcgctgcctgtcgccgtgcctgggcgacctggacccgaacgcgtaccgccgccgcctc
gacgaggcgctggcgttgttcagcggcgagggcgacggcggcaaggcgctgctgcgccat
ctcgacgacgagatgcgccgcgcggcggccgaggagcgcttcgagcgcgccggctggctc
cagcgccgccgggcgcggctcgccgtgctgctggagcggctgggcgggacgccgtcggcg
acccacacgcgcccgcggctggtgctcgcctcgcatccggaggccgcgcgcttcgacgcg
ctgtggctggtcggcgggcgcatcgcgcactgggcgccgctgaccgacgacctgcccgcg
tggacggtcaccgagccgctgctccccgcgaccaggccgtcggccgcgccgccgaccgcg
acgcccgacgagagcgcgcagatgcgcatcgcgacgacgtggctggcgtcgcatccgtcg
ctggagctgcggctgacgccggagacgacccgcgcccgcgtcgagcggttcgtcgggcgc
gcgctgaccgccgcggcctga
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