Baekduia alba: DSM104299_02042
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Entry
DSM104299_02042 CDS
T09120
Symbol
oppA_1
Name
(GenBank) Oligopeptide-binding protein OppA
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
bala
Baekduia alba
Pathway
bala02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bala00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DSM104299_02042 (oppA_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bala02000
]
DSM104299_02042 (oppA_1)
Transporters [BR:
bala02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
DSM104299_02042 (oppA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WCB93329
LinkDB
All DBs
Position
2042838..2044649
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AA seq
603 aa
AA seq
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MQGRIRIGREALLAGAVAAGLAVAGCGGGGDSGGGSGSTSGAANAGASVNAKAAQAPGRR
GGTLIQLGASDVDYLDPGHTYYTQGLQVIYATNRPLYSYKPDDAAHPVPDMAAAAPKISP
DAKTVTVRLRTGVRYAPPVDRAVTSADVKYALERFFSVNVGGQYPGYFQVIQGAPAKPTT
GVKPIAGIATPDAHTIVFHLTKPTGVAFAAALSMPATVPVPEDYAKRFDDKNPSTYNTHV
AFTGPYMVKNDASGNLVGYRPGKAIELVRNPNWNAKTDFRPAYVDAIRMKTDFTDANVAA
RQVLDGKDMVLDTNPPAAVLKDLVQHVKDQYVTMPAGGYRYFPLNTEIKPFDDLNVRKAV
LAGFDRTAALKARGGKYTGEVATHLLPPGFPGFDQAGGAKGFDDLDFFNDKNESGDMATA
AKYFKLAGYPSGKYTGNARLLMVGANADPGKGQAEVAAGQLEKMGFDVKLRLVPQDAVYT
NWCQVPSKKVAMCGGTAWFRDFADPEAMIEPLFKGALIDRSSGNANYSMLNDPKVDAAMD
KAALATGDDRLRQWAGVDRLVMQDAAAIPFDWDRTTLVRSKDVNGVANEFMTMWDYAYTS
LKD
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgcagggcaggatcaggatcgggcgggaggcgctgctggccggcgccgtggcggcgggg
ctggcggtcgccggttgcggaggcggcggcgacagcggcggcgggtcggggtcgacctcc
ggcgctgcgaacgcgggtgcgtcggtcaacgcgaaggccgcgcaggcgccagggcgccgg
ggcgggacgctgatccagctcggggcctccgacgtcgactacctcgacccgggccacacc
tactacacgcagggcctgcaggtcatctacgcgaccaaccggccgttgtactcctacaag
ccagacgacgccgcgcacccggtcccggacatggcggcggccgcccccaagatctccccg
gacgccaagacggtcaccgtccggctgcgcacgggcgtcaggtacgcgccgccggtcgac
cgcgcggtcacgagcgccgacgtcaagtacgcgctggagcgcttcttctcggtcaacgtc
ggcggtcagtaccccggatacttccaggtcatccagggcgcgccagccaagccgacgacc
ggcgtcaagccgatcgcgggcatcgcgacgccggacgcgcacacgatcgtcttccacctc
accaagccgaccggcgtcgcgttcgcggcggcgctgtcgatgccggcgaccgtgcccgtc
cccgaggactacgccaagcggttcgacgacaagaacccgtcgacctacaacacgcacgtc
gcgttcaccgggccgtacatggtcaagaacgacgcgtcgggcaacctggtcggctaccgg
ccgggcaaggccatcgagttggtgcgcaaccccaactggaacgcgaagaccgacttccgt
cccgcctacgtcgacgcgatccggatgaagacggacttcaccgacgccaacgtcgcggcg
cgccaggtgctcgatggcaaggacatggtgttggacaccaacccgccggcggcggtgctg
aaggacctcgtccagcacgtcaaggaccagtacgtgacgatgccggccggcggctaccgc
tacttcccgctcaacacggagatcaagccgttcgacgacctcaacgtgcgcaaggcggtg
ctcgcaggcttcgaccgcacggcggcgctgaaggcgcgcggcggcaagtacaccggcgag
gtcgcgacgcacctgctgccgccgggcttcccgggcttcgaccaggccggtggcgccaag
ggcttcgacgacctcgacttcttcaacgacaagaacgagagcggcgacatggcgacggcg
gccaagtacttcaagctggccggctacccgagcggcaagtacaccgggaacgcgcggctg
ctgatggtcggcgccaacgccgatccgggcaagggccaggccgaggtcgccgccgggcag
ctggagaagatgggcttcgacgtcaagctgcggctggtcccgcaggacgcggtgtacacc
aactggtgccaggtcccgtccaagaaggtcgcgatgtgcggcggcaccgcgtggtttcgg
gacttcgcggaccccgaggcgatgatcgagccgctgttcaagggcgcgctgatcgaccgc
tccagcggcaacgccaactactccatgttgaacgacccgaaggtcgacgcggcgatggac
aaggccgcgctggcgaccggcgacgaccgcctgcggcagtgggccggcgtcgacaggctc
gtgatgcaggacgctgccgcgatcccgttcgactgggaccggacgacgctcgtccgctcc
aaggacgtcaacggcgtggcgaacgagttcatgaccatgtgggactacgcctacacgtcg
ctgaaggactga
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