Baekduia alba: DSM104299_02343
Help
Entry
DSM104299_02343 CDS
T09120
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bala
Baekduia alba
Pathway
bala03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bala00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DSM104299_02343 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bala03021
]
DSM104299_02343 (rho)
03019 Messenger RNA biogenesis [BR:
bala03019
]
DSM104299_02343 (rho)
Transcription machinery [BR:
bala03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DSM104299_02343 (rho)
Messenger RNA biogenesis [BR:
bala03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DSM104299_02343 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
Rho_N
ATP-synt_ab
AAA_22
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
WCB93627
LinkDB
All DBs
Position
2337833..2339269
Genome browser
AA seq
478 aa
AA seq
DB search
MSVITRSALEASPLADLHAIASELGIDGFRRLRKADLVDKIIAQQGGEDAVAEAAASDDA
AVEEKPKRRSRSGRGTRTRRKDADEDGSTDEDAGDDAVATDDDVVATEDAVVEEAIEEEE
AAEAEVEEEIAAEKPRRRSRGGRGRSRDRDRDEDRDDDRDRDRNGDRNGDRDRDEDREDR
VIEGTVELLPNGSGFVRLTPPDPSDDDVYVSAAQVRRCELVNGDKVGGPVREPRRSERYP
SLIRIDTINARPADEVAEGTHFDDLPCALPTERLALGSEDATLKAIEWLTPIGKGSRVTI
VGEAHAGKSEALKRLAGALKGVEGLEVHVVLAAVRPEECAEWRSGEIEPVAALSLGASPD
AAGQAVERAIDTAKRITARGGDVVVLVDGLDGLAPHAARRALAAARNIVDGGSLTIVATA
SAPVGGETTIIALDRTLTRTGRFPALDLVASGTLRPELLVGDAGADAIAQARGQALGA
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcatcacccgttccgcgctggaggccagcccgctggccgacctgcacgccatc
gcgtccgagctcggcatcgacggcttccgccgtctgcgcaaggccgacctggtggacaag
atcatcgcccagcagggtggggaggacgcggtcgccgaggccgccgcctcggacgacgcg
gccgtcgaggagaagcccaagcgccgctcgcgcagtggccgtggcacgcgcacccgccgc
aaggacgcagacgaggacggcagcaccgacgaggacgccggcgacgacgccgtcgcgacc
gacgacgacgtcgtcgccaccgaggacgccgtcgtcgaggaggccatcgaggaggaggag
gccgccgaggccgaggtcgaggaggagatcgcggccgagaagccgcggcgccgttcgcgc
ggcggccggggccggtcgcgcgaccgcgatcgcgacgaggaccgcgacgacgaccgcgac
cgcgaccgcaacggcgaccgcaacggcgaccgtgaccgcgacgaggaccgcgaggaccgc
gtcatcgagggcaccgtcgagctgctgcccaacggctccggcttcgtccgcctcaccccg
ccggacccgtccgacgacgacgtgtacgtgtcggccgcgcaggtccgccgctgtgagctc
gtcaacggtgacaaggtcggcgggccggtgcgcgagccgcgccgctccgagcgctacccg
tcgctgatccgcatcgacaccatcaacgctcgcccggccgacgaggtcgccgagggcacg
cacttcgacgacctgccgtgcgcgctgccgaccgagcgcctggcgctcggctcagaggac
gcgacgctcaaggcgatcgagtggctgacgccgatcggcaagggctcgcgcgtgacgatc
gtcggcgaggcccacgcgggcaagtcggaggccttgaagcggctggccggcgcgctgaag
ggcgtcgagggcctggaggtccacgtcgtcctcgccgcggtccgcccggaggagtgcgcc
gagtggcgctccggcgagatcgagccggtcgccgcgctgtcgctcggcgcgtcgcccgac
gccgccggccaggcggtcgagcgcgcgatcgacaccgccaagcgcatcacggcgcgcggt
ggcgacgtcgtcgtcctggtcgacggcctcgacgggctggcgccgcacgcggcccgacgc
gcgctggccgcggcgcgcaacatcgtcgacggcgggtcgctgacgatcgtcgccacggcg
tcggccccggtcggcggcgagacgacgatcatcgcgctggaccgcacgctgacccgcacg
ggccgcttcccggcgctggacctcgtcgcgtccggcacgctgcgcccggagctgctggtc
ggcgacgccggcgcggacgccatcgcgcaggcgcgcggccaggcgctgggggcgtaa
DBGET
integrated database retrieval system
