Baekduia alba: DSM104299_02937
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Entry
DSM104299_02937 CDS
T09120
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bala
Baekduia alba
Brite
KEGG Orthology (KO) [BR:
bala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bala03016
]
DSM104299_02937 (thpR)
Enzymes [BR:
bala01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
DSM104299_02937 (thpR)
Transfer RNA biogenesis [BR:
bala03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
DSM104299_02937 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
WCB94207
LinkDB
All DBs
Position
complement(2916067..2916618)
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AA seq
183 aa
AA seq
DB search
MSARLFIALDIGDEQRRLLVHWAREAVGHDRGMRVVAAGNVHLTLAFLGHRSPDEIGPLS
ELVEAFDGRGAPALTTGSALWLSPRRPHVLTVEVHDDAGGLGDLHRDLWDELEALGYERE
HRRLRPHLTVARVRHGWTAPGGPLPPTPDLGLDVRGVVLMRSWLGGGPARYEPLSRAEFA
AES
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcgcctcttcatcgccctggacatcggcgacgagcagcgccggctgctggtc
cactgggcgcgcgaggccgtcgggcacgaccgcgggatgcgcgtcgtcgccgccgggaac
gtccacctcacgctcgcgttcctcggccatcgctcgccggacgagatcggcccgctgagc
gagctcgtcgaggccttcgacggccgtggcgcgccggcgttgacgaccggcagcgcgctg
tggctctcgccgcggcggccgcacgtcctgaccgtcgaggtccacgacgacgcgggcggg
ctcggcgacctgcaccgcgacctctgggacgagctcgaggcgctggggtacgagcgcgag
caccggcgcttgcggccgcacctcacggtggcccgcgtccggcacggctggacggcgccc
ggcggcccgctgccaccgacgccggacctcggcctcgacgtccgcggcgtggtgctcatg
cggtcctggctgggcggcggcccggcccgctacgagccgctctcccgtgcggaatttgcc
gcagaatcgtga
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