KEGG   Baekduia alba: DSM104299_03009
Entry
DSM104299_03009   CDS       T09120                                 
Name
(GenBank) RecJ-like ssDNA exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bala  Baekduia alba
Pathway
bala03410  Base excision repair
bala03430  Mismatch repair
bala03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bala00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    DSM104299_03009
   03430 Mismatch repair
    DSM104299_03009
   03440 Homologous recombination
    DSM104299_03009
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bala03400]
    DSM104299_03009
DNA repair and recombination proteins [BR:bala03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     DSM104299_03009
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     DSM104299_03009
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      DSM104299_03009
SSDB
Motif
Pfam: DHH RecJ_OB DHHA1 DUF2399
Other DBs
NCBI-ProteinID: WCB94277
LinkDB
Position
complement(2988224..2990779)
AA seq 851 aa
MLTPRLDVPPCDSAAALALARDLGMSFPVGQALVRRGITSLDDARAWLAGVDEHPASAFR
GIDEAIAVLLRHAQAGTRITVHGDYDVDGVTSTAILVRALRGVGAVVDWYLPSRAEDGYG
LSAATVEKLAARGTKLLVTTDCGITAVDEVALAKSLGLDVVVTDHHSPRADGRLPDAPIV
HPAVCGYPCPDLCAGGVAHKVAGALLEAAGHDAAIALADLDLVALATVADCVPLRGENRR
LVRQGLVALGRTEKPGLRALMRVARVDPTRVDARALGFGLAPRINAAGRLHRADAALELL
LSHDEAHATEIAEELDRANADRRFVEQRITFEAEAQVAELGDQPAYVLWADGWHAGVIGI
VASRIAERHHRPVVMIALREGEAEGTGSGRSIPAFDLLGGLDACAESLIRHGGHRAAAGC
TIARTSLDAFRAAFCAHAERVLAPEDLVPVERVDAVVSGDELGQGLAEELGRLAPFGIGN
PSISLLVPAARLVNPYPMSEGKHVRFTVEAGGIRAKAVAFGMGGLPEGAAEGRLHATFTL
ELNEYQGAVEPRLLLRKLLPAVEEAPELVGEAAPGSAEWREAVLAAATSRAPQLAGVVAA
AERSLAAAPGSSAAAPRDAAASARTLASAASRAVSGPSAGPGPAQRTVRDRRGTGLAGTI
AALVHTGEPVLVVAADGPARVRQLTGRLGGFAITSWDVLEREPGLVDGYHHLVALDPPMH
PDQEAVLTAGDPTRMAHLAWGEPELRYSRDVLDRDTALRPALVGAYRALRDGSALDAALA
QRPAHAAGRLLAVLVELGLVEVDPADGSVTVPAAQHTDLERSPAFVAAQRRHAEGTAWLT
SASATAPRQAA
NT seq 2556 nt   +upstreamnt  +downstreamnt
atgctcacaccgcgactcgacgtcccgccgtgcgacagcgccgcggcgctggcgctggcg
cgcgatctcgggatgagcttcccggtcggccaggcgctggtgcggcgtgggatcacctcg
ctcgacgacgcgcgcgcgtggctggcgggcgtcgacgagcatccggcgtcggccttccgg
ggcatcgacgaggcgatcgcggtcctgctgcgccacgcccaggccgggacgcggatcacg
gtccacggcgactacgacgtcgacggcgtgacgtccacggcgatcctcgtgcgcgcgctg
cgcggggtgggcgcggtcgtcgactggtacctgccgtcgcgtgctgaggacggctacggg
ctgagcgccgcgaccgtcgagaagctggcggcgcgcggcacgaagctgctggtgacgacc
gactgcgggatcacggcggtcgacgaggtcgcgctggcgaagtcgctcggcctggacgtc
gtcgtcaccgaccaccactcgccgcgggccgacggccgcctgcccgacgcgccgatcgtc
catccggccgtgtgcggctacccgtgccctgacctgtgcgccggcggcgtcgcccacaag
gtggcgggcgcgctgctggaggccgccggccacgacgcggcgatcgcgctggccgacctc
gacctggtggccctggccaccgtcgccgactgcgtgccgctgcgtggggagaaccggcgg
ctggtgcggcaggggctggtcgcgctcgggcggaccgagaagcccggtctgcgcgcgctg
atgcgggtggcgcgcgtcgatccgacgcgggtcgacgcccgcgcgctcggcttcggcctg
gcgccgcggatcaacgcggccgggcgcctgcaccgggccgacgccgcgctggagctgctg
ctctcgcacgacgaggcccacgcgaccgagatcgccgaggagctcgaccgcgcgaacgcc
gaccggcgcttcgtcgagcagcggatcaccttcgaggccgaggcccaggtcgccgagctc
ggcgaccagccggcctacgtcctctgggccgacggctggcacgcgggcgtgatcggcatc
gtcgcgtcgcggatcgcggagcgccaccaccggccggtcgtgatgatcgcgctgcgcgag
ggggaggccgaggggaccgggtcgggccgctcgatcccggcgttcgacctcctcggcggc
ctggacgcgtgcgcggagtcgctgatccgccacggcggccaccgcgccgccgcgggctgc
acgatcgcgcgcacctcgctcgacgcgtttcgcgcggcgttctgcgcgcacgccgagcgc
gtgctggcgccggaggatctcgtgccggtggagcgcgtcgacgcggtcgtgtccggcgac
gagctgggccagggcctggccgaggagctgggccggctggcgccgttcggcatcggcaac
ccgtcgatctcgctgctggtcccggccgcgcgcctggtgaacccgtacccgatgtccgag
ggcaagcacgtccgcttcaccgtcgaggccggcggcatccgggccaaggccgtcgccttc
gggatgggcgggctgccggaaggcgccgccgaaggccgcctccacgcgacgttcacgctc
gagctcaacgagtaccagggcgcggtcgagccgcgcctgctgctgcgcaagctgctgccg
gccgtcgaagaggccccggagctcgtgggcgaggccgcgcccgggtccgcggaatggcgc
gaggccgtgctggccgccgcgacgagccgcgcgccgcagctcgcgggcgtcgtcgccgcc
gcggagcgctcgctggccgcggcccccggatcctctgccgccgcgccgcgcgacgcggcg
gcgtccgcccgcacgctcgcctccgccgcctcgcgcgccgtctccggcccgtccgccggg
cccggccccgcgcagcgcacggtccgcgaccgtcgcggcaccggcctcgccggcacgatc
gccgcgctcgtccataccggcgagccggtcctcgtcgtcgccgccgacggccccgcgcgc
gtccgccagctcaccggccgcctcggcggcttcgcgatcaccagctgggacgtgctggag
cgggagccgggcctggtcgacgggtaccaccatctcgtggccctcgatccgcccatgcac
cccgaccaggaggctgtgctcacggccggcgatcccacccggatggcccatctggcctgg
ggggagcctgagctacgctattcccgggatgtcctggatcgagatacggcgctgcgcccc
gccctcgtcggtgcctatcgcgccctgcgcgacggctcggcgctggacgccgcgctcgcc
cagcgtcccgcccacgccgcgggtcggctcctcgccgtcctcgtcgagctggggttggtc
gaggtcgatccggccgacgggtccgtcacggtcccggcggcccaacacacggacctggag
cgctcgccggccttcgtcgccgcccagcgccgccacgcggaggggacggcatggctgacc
agcgcgagcgcgaccgcaccacggcaggcggcgtag

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