Baekduia alba: DSM104299_03072
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Entry
DSM104299_03072 CDS
T09120
Symbol
mutM_2
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bala
Baekduia alba
Pathway
bala03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bala00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DSM104299_03072 (mutM_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bala03400
]
DSM104299_03072 (mutM_2)
Enzymes [BR:
bala01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DSM104299_03072 (mutM_2)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DSM104299_03072 (mutM_2)
DNA repair and recombination proteins [BR:
bala03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DSM104299_03072 (mutM_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF7573
NFACT_N
Zn_ribbon_6
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
WCB94338
LinkDB
All DBs
Position
complement(3049512..3050354)
Genome browser
AA seq
280 aa
AA seq
DB search
MPELPEVETIRRQLAPHVEGRTIRRLEILDPRWTLPLAPDEVVDAVQGRTIERLGRRGKY
FIFELADDVFLLVHLRMTGNLLLDPAPDTPYQRVLFDLDDGQVVRFCDPRRFGTGELAIG
DDALQAFFAGKLGIEPLGDELDGATLRALARGRRAPVKAFLLDQRHVAGVGNIYADEALF
RARIHPLRPVGTLKAAQYDALAQAVKDVLAAGIDAGGSTIDDFRHPDGVSGAFQNDFLVH
LRRDEPCHNCGTAIRKLVAAGRGTYVCESCQPRPRVRRRP
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagcttcctgaggtcgagacgatccgccgtcagctcgcgccccatgtcgagggg
cgcacgatccggcgcctggagatcctggatccgcgctggacgctgccgctcgcgcccgac
gaggtcgtcgacgcggtgcagggccggacgatcgagcgcctcgggcggcgcgggaagtac
ttcatcttcgagctggccgacgacgtcttcctgctcgtccatctgcggatgaccggcaac
ctgctgctggaccccgcgcccgacacgccctaccagcgcgtgctcttcgacctcgacgac
ggccaggtcgtccgcttctgcgacccgcgccggttcggcacgggggagctggcgatcggc
gacgacgcgctgcaggccttcttcgccggcaagctcgggatcgagccgctgggcgacgag
ctggacggcgcgacgctccgcgcgctggcccgcgggcgccgcgcgccggtcaaggcgttc
ctgctcgaccagcgccacgtcgcgggcgtcgggaacatctacgccgacgaggccctgttc
cgggcgcggatccatccgctgcgcccggtcggcacgctcaaggcggcgcagtacgacgcg
ctcgcccaggcggtcaaggacgtcctggcggcgggcatcgacgccggcggctcgacgatc
gacgacttccgccatccggacggcgtgtccggcgcgttccagaacgacttcctcgtgcac
ctgcggcgcgacgagccgtgccacaactgcggcacggcgatcaggaagctcgtcgcggcc
gggcgggggacctacgtgtgcgagtcctgccagccccggccgcgggtcaggcggcggcct
tga
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