KEGG   Baekduia alba: DSM104299_03521
Entry
DSM104299_03521   CDS       T09120                                 
Symbol
polA_1
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
bala  Baekduia alba
Pathway
bala03030  DNA replication
bala03410  Base excision repair
bala03420  Nucleotide excision repair
bala03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bala00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DSM104299_03521 (polA_1)
   03410 Base excision repair
    DSM104299_03521 (polA_1)
   03420 Nucleotide excision repair
    DSM104299_03521 (polA_1)
   03440 Homologous recombination
    DSM104299_03521 (polA_1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bala03032]
    DSM104299_03521 (polA_1)
   03400 DNA repair and recombination proteins [BR:bala03400]
    DSM104299_03521 (polA_1)
Enzymes [BR:bala01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DSM104299_03521 (polA_1)
DNA replication proteins [BR:bala03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     DSM104299_03521 (polA_1)
DNA repair and recombination proteins [BR:bala03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     DSM104299_03521 (polA_1)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DSM104299_03521 (polA_1)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc TPP_enzyme_C DNA_polI_exo1 NUDIX-like
Other DBs
NCBI-ProteinID: WCB94782
LinkDB
Position
complement(3476368..3478983)
AA seq 871 aa
MSENGSASSQDELYLIDGSSLAYRAFFALPESIATSTGVPTNAIFGFASMLVKLLTEHGQ
KPTIVVWDAGHSGRKEISTDYKATRQSRPDLLREQWPHLAPLVDAFGYKNVQVEGYEADD
VIASIAEKARAQDVPVVIVTGDRDIFQLIDPDSRVRVMATGRGITDTKLYDYQAVIDRYG
LPPEAIPDFYGLKGDTSDNIPGVPGIGDKTAASLLQEFGDLETVLGSVDKISGAKRKENL
TNHADDARLSKQLATIMRDIPVDIDPAHEAAREPDRSKLRDVFRQFELRAPLARLEDALA
ADDQAGVPAAMPAEPENVRVRVREGGVGDVRALGPADAEITIAFVAPEVPEGQLLAEEPV
WKFGAVVGEEAVVGAVDDPALLIGELGDRPVVAHDAKAWGVVPTNLTHDTLLAAYLLEPA
RRGFPFAEICEERGLKVETTEPLAADAALAQALAHWQREQLDDRGLTGLMDEVELPLVAV
LRDMEVAGVRLNKERLAQIRVRVQDEIADLERDIYALADDQFTIGSPQQLGAILFDKLGL
SRKRRGKTGFSTDARVLQAIRDEHPIIPKVERWRELNQLMKTYLDVLPQVADAESRIHTT
FVQAAATTGRLASTNPNLQNVPVRTELGREIRGCFEAAPGNVLISADYSQVELRVMAFIA
DEPVLKEIFVRGEDVHTATASTVFGRPAEELTPMDRSKAKMINYGIVYGLSDYGLADRLN
IPREEAKAFIDTYLERFARVAAFMATTIEEAKERGHVTTLYGRRRQIPELRARNYQVRTL
GERLAVNTVIQGTAADVMKLAMIGVHRALVASGLTTRMILTIHDELLFEGPPEEAEQVKE
LAEREMVAPWGDRTPPLAVDAGVGITWLEAK
NT seq 2616 nt   +upstreamnt  +downstreamnt
atgtcggagaacgggtcagccagcagccaggacgagctctacctcatcgacggaagctcg
ctggcctaccgggcgttcttcgcgctgcccgagtcgatcgcgacgtcgacgggcgtgccg
accaacgcgatcttcgggttcgcctcgatgctggtcaagctgctgaccgagcacgggcag
aagccgacgatcgtcgtctgggacgcggggcactccggacgcaaggagatctcgaccgac
tacaaggccacgcgccagtcgcgccccgacctcctgcgcgagcagtggccgcacctcgcc
ccgctggtcgacgcgttcggctacaagaacgtgcaggtcgagggctacgaggccgacgac
gtcatcgcctcgatcgccgagaaggcgcgggcccaggacgtcccggtcgtgatcgtcacc
ggcgaccgcgacatcttccagctgatcgacccggactcgcgcgtgcgcgtcatggcgacc
gggcgcgggatcaccgacaccaagttgtatgactaccaggcggtcatcgaccgctacggc
ctgccgcccgaggcgatcccggacttctacggcctcaagggcgacacgtcggacaacatc
cccggcgtccccggcatcggcgacaagaccgcggcgtcgctgctgcaggagttcggcgac
ctggagacggtcctcggctcggtggacaagatctccggcgccaagcgcaaggagaacctg
accaaccacgccgacgacgcgcgcctgtccaagcagctcgcgacgatcatgcgcgacatc
cccgtcgacatcgatcccgcgcacgaggccgcgcgcgagccggaccgctccaagctccgt
gacgtcttccgccagttcgagctgcgcgcgccgctggcgcgcctcgaggacgcgctggcc
gccgacgaccaggccggcgttcccgccgcgatgcccgccgagcccgagaacgtgcgcgtc
cgggtgcgcgagggcggcgtcggcgacgtccgggcgctcgggccggccgacgccgagatc
acgatcgccttcgtcgcgcccgaggtgcccgagggccagctgctggctgaggagccggtc
tggaagttcggcgcggtcgtgggggaggaggcggtcgtcggcgccgtcgacgacccggcc
ctgctgatcggcgagctcggcgaccggcccgtcgtcgcgcacgacgcgaaggcgtggggc
gtcgtcccgaccaacctcacgcacgacacgctgctcgccgcctacctgctggagcccgcc
cgccgcggcttcccgttcgccgagatctgcgaggagcggggcctgaaggtggagacgacc
gagccgctggccgccgacgcggcgctggcccaggcgctggcgcactggcagcgcgagcag
ctcgacgaccgcgggctgaccggcctgatggacgaggtcgagctgccgctcgtcgccgtc
ctgcgcgacatggaggtcgcgggcgtccgcctcaacaaggagcgcctggcgcagatccgg
gtccgcgtccaggacgagatcgccgacctggagcgcgacatctacgcgctggccgacgac
cagttcacgatcggctcgccgcagcagctcggcgccatcctgttcgacaagctggggctg
tcgcgcaagcgccgcggcaagaccggcttctcgaccgatgcgcgggtgctgcaggcgatc
cgcgacgagcacccgatcatccccaaggtcgagcgctggcgcgagctcaaccagctgatg
aagacctacctcgacgtgctgccgcaggtggccgacgcggagtcgcgcatccacaccacc
ttcgtgcaggccgcggcgacgaccggacggctggcgtcgacgaacccgaacctccagaac
gtgccggtccgcaccgagctgggccgcgagatccgcggctgcttcgaggcggcgcccggc
aacgtgctgatcagcgccgactactcgcaggtcgagctgcgcgtgatggcgttcatcgcc
gacgagccggtgctgaaggagatcttcgtccgcggcgaggacgtgcacaccgcgaccgcc
tcgacggtcttcggccggccggccgaggagctcacgccgatggaccgctccaaggccaag
atgatcaactacgggatcgtgtacgggttgagcgactacgggctcgccgaccggctcaac
atcccgcgcgaggaggccaaggccttcatcgacacctacctcgagcgcttcgcgcgcgtc
gccgcgttcatggcgacgacgatcgaggaggccaaggagcgcggccacgtcaccacgctc
tacggccgccgccgccagatcccggagctgcgggcccgcaactaccaggtgcgcacgctc
ggcgagcgcctcgcggtcaacacggtcatccagggcacggcggccgacgtgatgaagctc
gcgatgatcggcgtgcaccgcgcgctggtcgcctccggcctgacgacgcggatgatcctg
acgatccacgacgagctgctgttcgagggcccgccggaggaggccgagcaggtcaaggag
ctcgcggagcgtgagatggtcgcgccgtggggcgaccgcacgccgccgctggccgtcgac
gccggcgtcgggatcacctggctcgaggccaagtag

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