Baekduia alba: DSM104299_04466
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Entry
DSM104299_04466 CDS
T09120
Symbol
sigF_5
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
bala
Baekduia alba
Brite
KEGG Orthology (KO) [BR:
bala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bala03021
]
DSM104299_04466 (sigF_5)
Transcription machinery [BR:
bala03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DSM104299_04466 (sigF_5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
MarR_2
HTH_23
HTH_28
HTH_Tnp_ISL3
HTH_Crp_2
HTH_24
MarR
DUF134
HTH_3
KORA
HTH_38
HTH_10
GerE
Phage_antitermQ
HTH_37
PhyR_sigma-like
UPF0122
HTH_31
HTH_19
HTH_AraC
HTH_15
HTH_ParB
DUF7343
HTH_Tnp_4
Phage_pRha
Motif
Other DBs
NCBI-ProteinID:
WCB95717
LinkDB
All DBs
Position
complement(4456449..4457210)
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AA seq
253 aa
AA seq
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MYPTTATARGGDDVRALLHRWHFDGDRAARDEVAARMLPLARSLARRYANKGEPLDDLEQ
VACVGLIKAIDRFDLSRDVRFATYAVPTIAGELKRHFRDRGWMMRVPREVQELSGKIGIV
RERLVHDLARSPTVAELARATGTDDDRVMEALAAAEAYRTLSLDQPFQDGTGPLEAIGDD
DLGFERAEARAMLADGLHELAPREREIVRLRYFEGLTQREIAEHIGISQMHVSRLIRRTV
QQLRDRIAMPAAA
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgtacccgacgacggccacggcccgcggcggcgacgacgtgcgcgcgctgctgcatcga
tggcacttcgacggcgaccgcgcggcccgtgacgaggtggcggcccgcatgctgccgctc
gcgcgcagcctcgcgcgccgctacgccaacaagggcgagccgctcgacgacctcgagcag
gtcgcgtgcgtcggtctgatcaaggccatcgaccgcttcgacctgagccgcgacgtgcgg
ttcgcgacctacgcggtgccgacgatcgcgggcgagctcaagcggcacttccgcgaccgc
ggctggatgatgcgcgtgccgcgcgaggtccaggagctcagcggcaagatcggcatcgtg
cgcgagcggctggtccacgacctcgcgcgctcgccgaccgtggccgagctggcgcgggcg
accggcaccgacgacgaccgcgtcatggaggcgctggcggcggcggaggcctaccgcacg
ctctcgctcgaccagccgttccaggacggcaccgggccgctggaggcgatcggcgacgac
gacctcggcttcgagcgcgccgaggcgcgcgcgatgctcgccgacggcctgcacgagctg
gccccgcgcgagcgcgagatcgtccgcctgcgctacttcgagggcctgacgcagcgggag
atcgccgagcacatcggcatctcgcagatgcacgtctcgcgtctcatccggcgcaccgtg
cagcagctgcgcgacaggatcgcgatgcccgccgccgcttag
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