Baekduia alba: DSM104299_04822
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Entry
DSM104299_04822 CDS
T09120
Name
(GenBank) RNA polymerase sigma factor
Organism
bala
Baekduia alba
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
MarR_2
HTH_AsnC-type
HTH_31
zf-HC2
HTH_24
Motif
Other DBs
NCBI-ProteinID:
WCB96067
LinkDB
All DBs
Position
complement(4828215..4829891)
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AA seq
558 aa
AA seq
DB search
MQAVRAGDDHAFERLYHRYHRRISAYIFGMVHDHGRAEDLTQEVFVSALRRMRQTDREIA
FKPWVYEIAKNACIDAFRRAKRTEEVSIDADDGHGLAPADHGKLHATAPTPEAAVEGKQN
LANLTGAFGGLSDAHHQILVMRELEGLSYREIGEQLGMSRPSVESTLFRARRRLTEEYEE
LKTGERCLRIQEVIGRGVEAGGRLGMRDQRRLSSHVSHCHPCRRHAVMAGLDAGALARRP
VRAKLGALLPIPAFIKRRWFGGGGTSDAAQHAPALAKASLAAAQYGEPTMAGWMKATAVA
TAVAVAGVGAGAAKHVSDGGGAQHRAAPVVERAASGGSPAAATGAAGGGARRTVVARAAG
GGAGSSSHTSSAGSAGRSAAGAAGGQHASGTGTFSGGGAGTPSSGGGGTSGSSGSGSSSG
GGGGGESASSASKPGGGGGSSSSAKKPASGATDPLTSAVDQTAAAATGAAGAATGGGGAA
APQPLIQPSLAPLTQPASTPPPQTAGQVVSGATDVLGGTVGGQAGEAVKQTGAAVGDTVD
KVTTGLTDAATGLLGGGK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggccgttcgcgccggggacgatcacgccttcgagcgcctgtatcaccgctatcac
cggcggatcagcgcctacatcttcggcatggtccacgaccacggacgggcggaggacctc
acgcaggaggtcttcgtcagcgcgctgcgccgcatgcggcagaccgaccgcgagatcgcg
ttcaagccgtgggtctacgagatcgccaagaacgcgtgcatcgacgcgttccgccgcgcg
aagcggaccgaggaggtgtcgatcgacgccgacgacggtcacgggctcgccccggccgac
cacggcaagctgcacgcgaccgcgcccacgcccgaggccgcggtcgagggcaagcagaac
ctcgcgaacctgacgggcgcgttcggcggtctgtccgacgcgcaccaccagatcctcgtg
atgcgcgagctggaaggcctgtcctaccgcgagatcggcgagcagctcggcatgtcgcgg
ccgtcggtcgagtccacgctgttccgcgcgcgccgccggctgaccgaggagtacgaagag
ctgaagaccggcgagcgctgcctgcggatccaggaggtcatcgggcgcggcgtcgaggcc
ggcgggcgcctggggatgcgcgaccagcgccgcctctcctcgcacgtgtcgcactgccat
ccgtgccgccggcacgcggtcatggccgggctggacgcgggcgcgctggcgcggcgtccg
gtgcgcgcgaagctcggcgcgctgctgccgatcccggcgttcatcaagcgccgctggttc
ggtgggggcggcacgtcggacgcggcgcagcacgcgccggctcttgcgaaggcgtcgctg
gccgccgcccagtacggcgagccgacgatggccgggtggatgaaggcgacggcggtcgcg
acggcggtggcggtcgcgggcgtcggcgcgggcgcggccaagcacgtgagcgatggcggc
ggcgcgcagcaccgggcggcgccggtggtcgagcgcgccgcgagcggcggctcgcccgcg
gccgcgacgggtgccgcgggcggcggcgcacggcgcacggtggtggcgcgggcggccggc
ggtggcgccgggtcctcgtcgcacacgagctcggcgggcagcgcgggccggagcgccgcg
ggcgcggccggtgggcagcacgccagcggcaccgggaccttcagcggtggcggcgccggg
acgccgtcgagcggcggcggtgggacgtccgggtcgagcggctcggggagctcctccggc
ggcggtggcggcggcgagagcgcgtcgtcggcgtccaagccgggtggcggcggtgggtcg
tcgtcgagcgccaagaagccggccagcggcgcgaccgatccgctgaccagcgcggtcgac
cagaccgcggccgcggcgaccggcgcggccggcgcggccaccggtggcggcggggcggcg
gcgccgcagccgctgatccagccgagcctcgcgccgctcacgcagccggcgagcacgccg
ccgccgcagacggcggggcaggtcgtgtccggcgcgaccgacgtgctcggcggaaccgtc
ggcgggcaggccggcgaagcggtcaagcagacgggcgccgcggtgggcgatacggtcgac
aaggtgacgaccggcctgaccgacgcggcgaccggcctcctcggcggaggcaagtga
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