Baekduia alba: DSM104299_05566
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Entry
DSM104299_05566 CDS
T09120
Symbol
yhaM_1
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
bala
Baekduia alba
Brite
KEGG Orthology (KO) [BR:
bala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bala03019
]
DSM104299_05566 (yhaM_1)
Messenger RNA biogenesis [BR:
bala03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DSM104299_05566 (yhaM_1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
HDOD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
WCB96798
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All DBs
Position
5572206..5573201
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AA seq
331 aa
AA seq
DB search
MLVRDLQHGSDLDQVLLVREAARRPRHDGSEYLKLVLGDRTGGVPAIVWEELPHALELCR
AGSPVHVVGRYEVDQRWGAQIAILALKPAVDGTFDPSILQDGPPQDIDAMETQFRELLAT
VQDPHLRRLLDAFFGEGSETWAMYRIAPAAKKYHQAYLHGLLEHCLTVAQAVHGASQVFP
GIDHDVAVTGALLHDIGKLEAYTVDAPIDMTDDGRLQGEIPLGYYRVRRLIEDLPGFPTD
LAQSVLHIILSHHGSLEHGSPVVPCTREATLVHMIDNLGGRLGSFDRLEKSLPPGSAWST
FDRAIGAGAYFGSAGTSATPITAEDRRSQAA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgttcgtgacctccagcacggctccgacctcgaccaggtgctgctggtccgcgag
gccgctcggcggccgcgtcacgacggcagcgagtacctcaagttggttctcggcgaccgc
acgggcggcgtcccggccatcgtctgggaggagctcccgcatgccctggagctgtgccgc
gcgggctcgccggtgcacgtcgtcggccgctacgaggtcgaccagcgctggggcgcgcag
atcgcgatcctggcgctgaagcccgccgtcgacggcacgttcgacccgtcgatcctccag
gacgggccgccgcaggacatcgacgcgatggagacgcagttccgcgagctgctcgccacc
gtgcaggacccgcacttgcgtcggttgttggatgccttcttcggcgaaggctccgagacc
tgggcgatgtaccgcatcgcgcccgccgcgaagaagtaccaccaggcctacctgcacggg
ttgctggagcattgcctcacggtcgcccaggccgtccacggcgcctcccaggtcttcccg
ggcatcgaccacgacgtcgccgtcaccggcgcgttgttgcacgacatcggcaagttggag
gcctacaccgtcgacgcgccgatcgacatgaccgacgacggccgcctccagggcgagatc
ccgctcggctactaccgggtgcgacggttgatcgaggacctccccggcttcccgaccgac
ctcgcccagtcggtcctgcacatcatcctgagccaccacggctccctcgagcacggctcc
cccgtcgtcccctgcacccgcgaggcgacgctggtccacatgatcgacaacctcggcggc
cgcctcggctccttcgaccgcctcgagaagtcccttccacccggctccgcctggtccacc
ttcgaccgcgccatcggcgccggcgcctacttcgggtccgccggcacgtccgcgacaccg
atcaccgccgaagaccgccggtcgcaggcggcgtag
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