Baekduia alba: DSM104299_05654
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Entry
DSM104299_05654 CDS
T09120
Symbol
yhaM_2
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
bala
Baekduia alba
Brite
KEGG Orthology (KO) [BR:
bala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bala03019
]
DSM104299_05654 (yhaM_2)
Messenger RNA biogenesis [BR:
bala03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DSM104299_05654 (yhaM_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Cas3_HD
DUF6415
ParB_dimer
HDOD
Motif
Other DBs
NCBI-ProteinID:
WCB96886
LinkDB
All DBs
Position
5659094..5660017
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AA seq
307 aa
AA seq
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MMDPVAAPPHTAAPDAPTIATLRAGDEVEAVFACTRKERLMSRAGTPYLALELRDRTGAI
PARVFRDADVAAARFDRGDLVTVAGRVERFRDQLQLDVRAIAKDAGADPAAFLPVAYCDL
DELDGFLEHLANEVHDAGYAQLLAALLADASLRAEWRRAPCSRGGHHSYLGGLLEHTVAV
GTLALEACQLHPRLNSDLLITAALVHDLGKTEEFTYGAEIAQSEAGRLLGHVELGLRIVE
AAATRAPAMDADRRLALAHCVLTHHGADAAPNRRFGSAEALALYRLNALDASVKGALEHG
VGLDGQA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgatggatcccgtcgccgcccctccgcacaccgccgcgcccgacgccccgacgatcgcc
acgctccgcgccggcgacgaggtcgaggcggtcttcgcctgcacgcgcaaggagcgcctg
atgtcccgcgccgggacgccgtacctggcgctggagctgcgcgaccgcacgggcgcgatc
ccggcccgcgtgttccgcgacgccgacgtcgccgcggcgcgcttcgaccgcggagacctc
gtcaccgtcgccggccgggtggagcgcttccgcgaccagctccagctcgacgtccgggcc
atcgccaaggacgccggcgccgacccggccgccttcctgcccgtcgcctactgcgacctc
gacgagctcgacggcttcctcgagcacctcgccaacgaggtccacgacgccggctacgcg
cagctgctggccgcgctgctcgccgacgcctccctgcgggccgagtggcgccgcgcgccg
tgcagccgcggcggccaccactcctacctcggcggcctgctcgagcacaccgtcgcggtc
gggacgctcgcgctcgaggcctgccagctgcacccgcgcctgaactccgacctcctgatc
acggccgcgctcgtccacgacctcggcaagaccgaggagttcacctacggcgccgagatc
gcgcagtccgaggccggccgcctgctcggccacgtcgagctcggcctgcggatcgtcgag
gcggcggccacgcgcgcgccggcgatggacgccgaccgccgcctcgcgctcgcgcattgc
gtcctgacccaccacggcgccgacgctgcgcccaaccgccgcttcggctcggccgaggcg
ctcgccctgtaccgcctcaacgcgctcgacgcctccgtcaagggcgcactggagcacggc
gtgggcctcgacggccaagcctga
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