Brevundimonas albigilva: M8231_00225
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Entry
M8231_00225 CDS
T08389
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
balb
Brevundimonas albigilva
Pathway
balb03030
DNA replication
balb03410
Base excision repair
balb03420
Nucleotide excision repair
balb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
balb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M8231_00225 (polA)
03410 Base excision repair
M8231_00225 (polA)
03420 Nucleotide excision repair
M8231_00225 (polA)
03440 Homologous recombination
M8231_00225 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
balb03032
]
M8231_00225 (polA)
03400 DNA repair and recombination proteins [BR:
balb03400
]
M8231_00225 (polA)
Enzymes [BR:
balb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M8231_00225 (polA)
DNA replication proteins [BR:
balb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
M8231_00225 (polA)
DNA repair and recombination proteins [BR:
balb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
M8231_00225 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M8231_00225 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Taq-exonuc
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
URI15458
LinkDB
All DBs
Position
complement(37064..39985)
Genome browser
AA seq
973 aa
AA seq
DB search
MTDAADTPPAIEQDRELTQDGPALRLWMIDASAYIFRAYHALPPLTRKSDGLPVGAVQGY
CNMLWKLLKDMKGADGPTHLVAIFDHSEKTFRNTLYDQYKAHRPPPPEDLIPQFPLVREA
TAAFGVHCVELPGYEADDLIATYACKARDAGGEAVIVSSDKDLMQLIGRGVVMWDPMKDR
RLAEPEVFEKFGVGPEKMVDLQALIGDSVDNVPGAPGIGPKTAAQLLDEYGDLDTLLARA
GEIKQPKRRQTLIDFADQIRLSRELVRLTCDAPAPEAVDDFAVKDPDPQTLSEFLDKMEF
RSLARRVGDGKAEATETSAFAPKRAPNLSAPVASPRYAPKEVAAPSEPHVFDLDAYECVQ
TEEALDRWIERAREAGVVGLDTETDALSATHAGLCGVSLALGPNDACYIPLTHEHEPAAN
AGGLDFGGEADTREPLTQLDKPTTLAKLKTLLEDPSVLKVLQNAKYDVAVFARRGIRVAP
YDDTLLLSYVLEGGLHGHGMDELARLHLGHEPIAFKSVAGTGKSQKSFKHVQLAPATQYA
AEDADVTLRLWRILKPRLAREGLSTVYETLERPMPTVLADMELAGVRVDPDRLKRLSSEF
GLRMAELEQQAHEIAGRPFNVGSPRQIGEILFGELNLPGGKKTASGQWGTDASVLEELAL
THDLPRAILDWRQLSKLKGTYTDALTAAADPATDRVHTSYQLAAASTGRLASSDPNLQNI
PIRTETGREIRQAFIAAPGHVLISADYSQIELRLLAHIGDIPELKRAFKAGLDIHAATAS
EMFGVPVEGMPSETRRRAKAINFGIVYGISAFGLAAQLGIDQGEAGAYIKTYFERFPGIR
GYMDRTKAEVRQAGFVSTVFGRRIHIPAIHSKSGAERQFGERAAINAPIQGAAADIIRRA
MIRMPGALTDAGLSTRMLLQVHDELVFEAPEAEAEAAIAVIKRVMETAAEPAVALSVPLD
VEARAAANWDEAH
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgccgccgacacgccgcccgccattgaacaggaccgggagctgacccaggac
gggcccgccctgcggctgtggatgatcgacgcctcggcctacatctttcgcgcctaccac
gccctgccgcccctgacgcgcaagtccgacggcctgccggtcggggcggtccagggctac
tgcaacatgctgtggaagctcctgaaggacatgaagggcgccgacggcccgacgcacctg
gtggccatcttcgaccattccgagaagacgttccgcaacaccctgtacgaccagtacaag
gcccaccgcccgccgccgcccgaggacctgatcccgcagttcccgctggtgcgcgaggcg
accgcggccttcggcgtccactgcgtcgaactgccgggctacgaggccgacgacctgatc
gccacctacgcctgcaaggcgcgcgacgcgggcggcgaggcggtgatcgtcagttcagac
aaggacctgatgcagctgatcgggcgcggcgtggtcatgtgggatccgatgaaggaccgc
cgcctggccgagccggaggtgttcgagaagttcggcgtcggcccggagaagatggtcgac
ctgcaggccctgatcggcgacagcgtcgacaacgtccccggcgcccccggcatcggcccc
aagacggccgcccagctgctggacgaatacggcgacctggacacgctgctggcccgcgcc
ggcgagatcaaacagcccaagcgccgccagaccctgatcgacttcgccgaccagatccgc
ctgtcgcgcgaactggtgcgcctgacctgcgacgccccggcgcccgaggccgtcgacgac
ttcgcggtcaaggatccggacccgcagaccctgtccgaattcctcgacaagatggagttc
cgctcgctggcccggcgcgtcggggacggcaaggccgaggcgaccgagacctccgccttc
gcgcccaagcgcgcgcccaacctgtcggccccggtcgccagcccgcgctatgcgcccaag
gaggtcgccgcgccgtccgagccgcacgtcttcgacctggacgcctatgaatgcgtgcag
accgaggaggcgctggaccgctggatcgaacgcgcgcgcgaggccggcgtcgtcggcctg
gacaccgagaccgacgccctgtcggccacccatgcgggcctgtgcggcgtgtcgctggcg
ctggggccgaacgacgcctgctacattcccctgacccacgagcacgagccggcggcgaac
gccggcgggctggacttcggcggcgaggccgacacgcgcgaaccgctgacccagctggac
aagccgacaaccctggccaagttgaagaccctgctggaggatccgtcggtcctcaaggtg
ctgcagaacgccaagtacgacgtcgccgtcttcgcccggcgcggcatccgcgtcgccccc
tacgacgacaccctgctgctgtcgtatgtgctggagggcggcctgcacggccacggcatg
gacgagctggcgcgcctgcacctgggccacgagccgatcgccttcaagtcggtggccggg
acgggcaagagccagaagtcgttcaagcacgtgcagctggcccccgcgacgcaatatgcg
gccgaggacgccgacgtgacgctgcgcctgtggcgcatcctgaagccccgcctggcccgc
gagggcctgtccaccgtctatgagacgctggaacggccgatgccgaccgtcctggccgac
atggagctggccggcgtgcgtgtcgatcccgaccggctgaagcggctgtcctcggagttc
ggcctgcgcatggccgagctggagcagcaggcgcacgagatcgccggccgccccttcaac
gtcggctcgccccgccagatcggcgaaatcctgttcggagagttgaacctgcccggcggc
aagaagaccgccagcggccaatggggcaccgacgccagcgtgctggaggagctggccctc
acccacgacctgccccgcgccatcctggactggcgccagctgtccaagctgaagggcacc
tacaccgacgccctgaccgccgcggccgatcccgccaccgaccgggtccacacctcctac
cagctggcggccgcctcgaccggccggctggccagttccgatcccaacctgcagaacatc
ccgatccgcaccgagaccggccgcgagatccgccaggccttcatcgccgcgcccggccat
gtgctgatcagcgccgactacagccagatcgagctgcgcctcctggcccacatcggcgac
atccccgagctgaagcgcgccttcaaggccgggctggacatccacgcggccacggcttcg
gagatgttcggcgtccccgtcgagggcatgccgtccgagacccgtcgccgcgccaaggcg
atcaacttcggcatcgtctacggcatctcggccttcggcctggccgcccagctgggcatc
gaccagggcgaggcgggggcctacatcaagacctatttcgagcgcttccccggcatccgc
ggctacatggaccggaccaaggccgaggtgcgacaggcgggcttcgtctccaccgtcttc
ggccgccgcatccacatcccggccatccactccaagtccggggccgagcgccagttcggc
gagcgcgcggccatcaacgccccgatccagggcgccgccgccgacatcatccgccgcgcc
atgatccgcatgccgggcgccctgacggacgcgggcctgtccacccgcatgttgctgcag
gtccacgacgaactggtcttcgaagcccccgaagccgaggccgaggccgccatcgccgtg
atcaagcgcgtcatggagaccgccgccgaacccgccgtcgccctgagcgtcccgctggac
gtcgaagcccgcgccgccgccaactgggacgaggcgcactga
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