Brevundimonas albigilva: M8231_05820
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Entry
M8231_05820 CDS
T08389
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
balb
Brevundimonas albigilva
Brite
KEGG Orthology (KO) [BR:
balb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
balb03032
]
M8231_05820 (topA)
03400 DNA repair and recombination proteins [BR:
balb03400
]
M8231_05820 (topA)
Enzymes [BR:
balb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
M8231_05820 (topA)
DNA replication proteins [BR:
balb03032
]
Prokaryotic type
DNA Topoisomerases
M8231_05820 (topA)
DNA repair and recombination proteins [BR:
balb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
M8231_05820 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
KARI_N
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
URI16493
LinkDB
All DBs
Position
complement(1178495..1181110)
Genome browser
AA seq
871 aa
AA seq
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MNLVIVESPAKAKTINKYLGADYEVLASYGHVRDLPSKDGSVLPDDDFSMHWEADAKGAK
RLSEIAEAAKRADRVILATDPDREGEAISWHVLEVLNKKKALKDTHVERVTFNAITKSAV
LEAMANPRQLDMELVEAYLARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRIVVDR
EMEIEKFKPQEYWSIEADLNADSPPFTARLVKHAGKRVQRLDIKDEATAKAARAAIQAGD
FTINSIEKKPVRRNPAPPFTTSTLQQEAARKLGFTAQRTMQAAQKLYEGVDETGGLITYM
RTDGVSVSPEGLAQAREVIGKEYGPAYVPSEPRYYKVKAKNAQEAHEAIRPTNIARHPDS
VRLDSDLQRLYELIWKRMVASQMEAARLDRTTVEIETSDGQTGLRATGQVVTFDGFLAVY
EEGRDEKQKGAEGDEGEDDARRLPALKEGARAKVDAIRTDQHFTEPPPRYSEATLVKKLE
ELGIGRPSTYASTLSTLRDREYVRVDKNRFYPEDKGRLVTAFLEQFFRKWVEYDFTAALE
TQLDEVSAGDLNWKVLLRNFWQDFHAATQAAGELRTTAILDALNESLGAHIFPDKGDGSD
PRECPLCHQGQLSLKTSRFGAFIGCSRYPDCKYTRPVASPSAEDGSAESGDRELGIDPAT
GQPVQLKIGRFGPYVEITPPDGEKPKRSSLPKGWSPASLTLDQALRLLALPREVGVHPED
GKPITAGLGRYGPFVLHAGTYANVSDIEEVFEVGLNRAVALLAEKRAGRAGRGAAAAPLK
DLGAHPETGEPIHVMAGRFGPYVKSGKINATLPKGAAPEDLTLEDALPLLAAKAAAAPKK
KAPAKKAAAPKKAPAKKAATAKKAAPKKAED
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcgtcatcgtcgagagccccgccaaggccaagaccatcaacaagtatctcggc
gcggactatgaggtcctggcgtcctacggccacgtgcgcgatctgccgtccaaggacggc
tccgtcctgccggacgacgacttctcgatgcactgggaggccgacgccaagggcgccaag
cgcctgtccgaaatcgccgaggcggccaagcgcgccgaccgcgtgatcctggccaccgac
cccgaccgcgaaggcgaggcgatcagctggcacgtcctggaagtgctgaacaagaagaag
gcgctgaaggacacccacgtcgaacgcgtcaccttcaacgccatcaccaagtccgccgtg
ctggaggcgatggccaatccgcgccagctggatatggagctggtcgaggcctatctggcc
cgtcgcgcgctggactatctggtcggcttcaccctgtcgccggtcctgtggcgcaagctg
ccgggcgcccgctcggccggccgcgtccagtcggtcgcgctgcgcatcgtcgtcgatcgc
gagatggagatcgagaagttcaagcctcaggaatactggtccatcgaggccgatctgaac
gccgacagcccgcccttcaccgcccgcctggtcaagcacgccggcaagcgcgtccagcgc
ttggacatcaaggacgaggcgaccgccaaagccgcccgcgccgccatccaggccggcgac
ttcaccatcaattcgatcgagaagaagccggtccggcgcaatccggccccgcccttcacc
acctcgaccctgcagcaggaagccgcgcgcaagctgggcttcaccgcccagcgcaccatg
caggcggcccagaagctgtatgagggcgtcgacgagaccggcggcctgatcacctatatg
cggaccgacggcgtctcggtcagccccgagggcctggcccaggcgcgtgaggtcatcggc
aaggaatacggccccgcctacgttccctcggaaccgcgctattacaaggtgaaggccaag
aacgctcaggaagcgcacgaagcgatccggccgaccaacatcgcccgccaccccgattcc
gtgcgcctcgattccgatctgcagcgcctctacgaactaatctggaagcgcatggtagcc
tcccagatggaggcggcgcgcctggaccgcaccacggtcgagatcgagacctccgacggc
cagacgggcctgcgcgccaccggccaggtggtcaccttcgacggcttcctggccgtctat
gaggaaggccgcgacgagaagcagaagggggcggaaggcgacgagggcgaagacgacgcc
cgccgcctgccggcgctgaaggaaggcgcgcgcgccaaggtcgacgccatccgcaccgac
cagcatttcaccgaaccgcccccgcgctattcggaagccactctggtcaagaagctggaa
gagctgggcatcggccgcccctcgacctacgcctcgaccctgtcgaccctgcgcgaccgc
gaatatgtccgcgtcgacaaaaaccgcttctaccccgaggacaagggccgcctggtcacg
gccttcctggagcagttcttcaggaagtgggtcgaatacgacttcaccgccgccctggag
acccagctggacgaggtgtcggccggcgacctgaactggaaggtgctgctgcgcaacttc
tggcaggacttccacgccgcgacccaggccgccggggaactgcgcaccaccgccatcctg
gacgccctgaacgaaagcctgggcgcccatatcttcccggacaagggcgacggctctgac
ccgcgcgaatgccccctgtgccaccagggccagctcagcctgaagaccagccgcttcggc
gccttcatcggctgttcgcgctatcccgactgcaaatacacccgcccggtcgccagcccg
tcggccgaggacggttcggccgagagcggcgaccgcgaactgggaatcgacccggcgacg
ggccagccggtgcagctgaagatcggccgcttcggcccctatgtcgaaatcacgccgccg
gatggcgaaaagccgaaacgctcgtccctgcccaagggctggtcccccgcctcgctgaca
ctggaccaggcgctgcgtctgctggccctgccgcgcgaggtcggggtccaccccgaggac
ggcaagccgatcacggccggcctgggccgctacgggccgttcgtcctacacgccggcaca
tacgccaacgtctcggacatcgaggaggtgttcgaggtcggcctgaaccgcgccgtggcc
ctgctggccgaaaagcgcgccggccgggccggtcgcggcgccgcggcggccccgctcaag
gacctgggcgcccatcccgagacgggcgagccgatccacgtcatggccggccgcttcggc
ccctatgtgaagtccggcaagatcaacgccactttgcccaagggcgcggcgccggaagac
ctgacgctggaagacgccctgccgctactcgcagccaaggccgccgccgcgcccaagaag
aaggcccccgccaagaaggcggccgcgcccaagaaggcgccggccaagaaggccgcgacg
gccaagaaggcggccccgaagaaggctgaggactaa
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