Brevundimonas albigilva: M8231_06120
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Entry
M8231_06120 CDS
T08389
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
balb
Brevundimonas albigilva
Pathway
balb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
balb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M8231_06120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
balb03019
]
M8231_06120
03009 Ribosome biogenesis [BR:
balb03009
]
M8231_06120
Enzymes [BR:
balb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
M8231_06120
Messenger RNA biogenesis [BR:
balb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
M8231_06120
Ribosome biogenesis [BR:
balb03009
]
Prokaryotic type
rRNA processing factors
M8231_06120
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Anti-TRAP
DUF5351
CDC45
Motif
Other DBs
NCBI-ProteinID:
URI16549
UniProt:
A0ABY4SRJ7
LinkDB
All DBs
Position
complement(1238888..1241581)
Genome browser
AA seq
897 aa
AA seq
DB search
MSKTMLIDAAHAEETRVAIVDGRQVEEFDFESRARRQLRGNIYLAKVTRVEPSLQAAFVE
YGGNRHGFLAFNEIHPDYYQIPVADREAIMAEAHDDEDEDDLGRESTDDEVDPEAALAEE
ERLKRRLMRRYKIQDVIKRRQILLVQVVKDERGAKGAALTTWLSLAGRYCVLMPNTGKGG
GISRKITNTSDRRRLKSAVASLDVPKGMGLIIRTAGAKRTKAEIKRDYKYLLRLWETIRE
TTLASHAPAMIYEEENLVRRAVRDMFDKDFDGIQVEGVEGFKEARDFMRVLMPAQAKKVH
LYRGSRPLFAANGIEELLTQIHQPVVPLKSGGYLVINQTEALVAIDVNSGRATKERNVEQ
TAFKTNMEAAVEAARQLRLRDLAGLVVIDFIDMDEGKNNRAVEKVLKDALAADRARIQMG
RISPFGLMQISRQRRRLGVIEGATEACPHCQGTGRIRSAESAALMTLRAVDIEAGKNGAG
VVVLKVCTAVGLYILNHKRDYLQSLLERRGLNVIVQIDDSLAQGEHNIERTETNEDFVAP
EIELPNLDDDFDASAFEDEDEDSDEDEVIDDEDDEEDEDALDREDSDDDEPRERAERHDG
GRGRNRRRRRGGRRDEAEDAVVSVDDASDDEDENGRRRRRGRRGGRRVREDGERDVYTWV
RGRTPSLEDPYVWFDPLNPGRPEPRAEKTERVIPADDRAESLVEAVSEGAGDEGGRRRRR
RRGRGRGQDQAQDLGHEIKVENRATNEGMPPDGSPQTPMAVTTPTGPAAETEAPALAPEP
QRRRVRRKTARVETIEESVGEPHIEPHPDTAIEPNEATVDGEPAALDVTPEEAHAAQTAA
QAAAAPEPEPAPAPEPAVLAEPFEAPKPEIDVEAIIAEDPNQIVAPPEKPKRGWWRR
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagacaatgctgatcgatgcggcgcacgcggaagaaacccgcgtcgccatcgtg
gacggacgccaggttgaggaattcgacttcgaatcccgcgcccggcgccagctgcggggc
aacatctacctcgccaaggtcacccgcgtagagcccagcctgcaggccgccttcgtcgaa
tacggcggcaaccgtcacggcttcctggccttcaacgaaattcacccggactactaccag
atcccggtcgccgaccgcgaagccatcatggctgaggcgcacgacgacgaggacgaggac
gacctgggccgcgaatcgaccgacgacgaggtcgatcccgaagccgccctggccgaggaa
gagcgcctgaagcgtcgcctgatgcgccgctacaagatccaggacgtcatcaagcgccgc
cagattctgctggtgcaggtcgtcaaggacgagcgcggggccaagggcgcggccctgacc
acctggctgtcgctggccggccgctactgcgtgctgatgcccaatacgggcaagggcggc
ggcatcagccgcaagatcaccaacacctccgaccgccgccgcctgaagagcgccgtggcc
tcgctggacgtgcccaagggcatgggcctgatcatccgcacggccggcgccaagcggacc
aaggccgaaatcaagcgcgactacaaatatctgctgcgcctgtgggagacgatccgcgag
accaccctggcctcccacgccccggcgatgatctacgaggaagagaacctggtccggcgc
gccgtgcgcgacatgttcgacaaggatttcgacggcatccaggtcgagggcgtcgagggc
ttcaaggaagcgcgcgacttcatgcgcgtgctgatgccggcccaggccaagaaggttcac
ctgtatcgcgggtcgcgtccgctgttcgcggccaacggcatcgaggagctgctgacccag
atccaccagccggtcgttccgctgaagtcgggcggctatctggtgatcaaccagaccgag
gccctggtggccatcgacgtcaactcgggccgcgcgaccaaggaacgcaacgtcgagcag
acggcgttcaagaccaacatggaagcggcggtcgaggccgcccgccagctgcgcctgcgc
gacctggccggcctggtcgtgatcgacttcatcgacatggacgagggcaagaacaaccgc
gccgtcgaaaaggtgctgaaggacgccctggccgccgaccgcgcccgcatccagatgggc
cgcatctcgcccttcggcctgatgcagatcagccggcagcgtcgccgcctgggcgtgatc
gagggcgcgaccgaggcctgcccgcactgccagggcaccggccgcatccgttcggccgaa
tccgccgccctgatgacgttgcgcgcggtggatatcgaagccggcaagaacggcgcgggg
gtcgtggtgctgaaggtctgcaccgccgtgggcctgtatatcctgaaccacaagcgcgac
tatctgcagtcgctgctggaacgccgcggcctgaacgtcatcgtccagatcgacgacagc
ctggcccagggcgagcacaacatcgagcggaccgagaccaacgaggacttcgtcgcgccc
gagatcgaactgcccaacctggacgatgatttcgacgcttccgccttcgaggacgaggac
gaggacagcgacgaagacgaggtcatcgacgacgaggacgacgaggaagacgaggacgcg
ctggaccgcgaggacagcgacgacgacgaaccccgcgaacgcgccgagcgtcacgacggc
ggccggggtcgcaaccgccgccgccgccggggcggacgtcgcgacgaggccgaggatgcg
gtcgtctccgtcgacgacgcctcggacgatgaggacgagaacggccgtcgccgccgtcgc
ggtcgtcgcggcggtcgccgggtccgcgaggacggcgaacgcgatgtctatacctgggtg
cgcggccgcacgccgtcgctggaagacccctacgtctggttcgacccgctgaacccgggc
cggcccgaaccgcgcgccgagaagacggaacgcgtcattccggccgacgaccgtgcggaa
agcctggtcgaagcggtgtccgaaggcgcgggcgacgagggcggtcgccgtcgccgtcgc
cgtcgcggccgggggcgcggccaggatcaggcgcaggacctgggtcacgagatcaaggtc
gagaaccgcgccaccaacgagggcatgccgcctgacggctctccccagacgccgatggcc
gtgacgaccccgacgggtccggcggccgagaccgaagcgcccgctctcgcgcccgagccc
cagcgccgccgcgtgcgccgcaagaccgcccgtgtcgagacgatcgaggagagcgtcggc
gaaccgcacatcgaaccgcatcccgacacggccatcgagcccaacgaggcgacggttgac
ggcgaaccggcggctctggacgtgacgccggaggaggctcacgccgcccagaccgcggcc
caggccgcggctgcgccggaacccgagcccgcgcccgctcccgagccggccgtcctggcc
gagccgttcgaggcgcccaagcccgagatcgatgtcgaggccatcatcgccgaagacccg
aaccagatcgtcgcaccgcccgaaaagcccaagcgggggtggtggcgccgctga
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