Brevundimonas albigilva: M8231_06950
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Entry
M8231_06950 CDS
T08389
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
balb
Brevundimonas albigilva
Pathway
balb03030
DNA replication
balb03430
Mismatch repair
balb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
balb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M8231_06950 (dnaE)
03430 Mismatch repair
M8231_06950 (dnaE)
03440 Homologous recombination
M8231_06950 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
balb03032
]
M8231_06950 (dnaE)
03400 DNA repair and recombination proteins [BR:
balb03400
]
M8231_06950 (dnaE)
Enzymes [BR:
balb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M8231_06950 (dnaE)
DNA replication proteins [BR:
balb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M8231_06950 (dnaE)
DNA repair and recombination proteins [BR:
balb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M8231_06950 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
URI16698
UniProt:
A0ABY4SUX3
LinkDB
All DBs
Position
1399525..1402989
Genome browser
AA seq
1154 aa
AA seq
DB search
MSEAVNSQGFVHLRVRSAYSLLEGAIKAGKIGRMAADAGMPAVAVADRANLFGALEFSQT
TRDVGVQPIVACALPVVGIGGRINARWAKTPTVVLLAQNETGWLNLCALSSSAYLDAGDM
AEPGVAWDQVAARAEGLILLSGGPDGPVDPLFAQNKPAEAAQALQAMHAAFGDRFYVELQ
RHGLDDEKRAEPGLVRWAYDHDVPLVATNDVYYAKAAQAKSHDALLCIADGAFTGQDDRR
RITGQHWFKPPEAMRELFADLPEACDNTLDIARRCAFLVKTHAPILPRFDTGAGRSEPDE
LAHQAREGLKARLTQVTPAVPEEEYWARLEWEVGIIQQMGFPGYFLIVSDFIKWAKAHGI
PVGPGRGSGAGSLVAWSLTITDLDPLRFGLLFERFLNPERVSMPDFDIDFCQERREEVID
YVQAHYGKDRVAQIITFGTLQARAVLRDVGRVLQMPLGQVDRLCKMVPNNPANPVTLAQA
IDLEPRLKEARDSEPAVRTLLETALELEGLYRNASTHAAGIVIGDRPLTELVPLYQDPRS
TIPASQFNMKWVEPAGLVKFDFLGLKTLTTLDRARGYLERRGAAPDWNGLPLDDARTYEL
MASGQTVGVFQLESQGMRDTLRKMRCGSIEEITALISLYRPGPMEMIDTYIDRKFGRAEV
DYLHPSLKEVLTETYGVIIYQEQVMKIAQILAGYSLGEADLLRRAMGKKKKEEMDFQRAR
FIKGASEKGVSEAQSGGIFDLVAKFAGYGFNKSHAAAYALISFQTGWLKANHPVEFFAAS
MSLDLSNTDKLAVFYQDAKRFDVPVLPPDINRSSADFDVSWEDGRGAVLYALGAIRNVGL
EAMRHVIEVREQGGRFVDIFDFLERVDPRCVNKRALEGLAKAGAFDSLHSNRRQLVEQAD
VLMAYCQSVAAERASAQVNLFGGDQAHAGRPRLKSVEPWVGPDRLDQELSAVGFYLSGHP
LDDMAQALKRKRVTFVAEALPLAESGHEAFQMAGVVRRRQERASARTGEKFAFVTFSDPT
GEFECLFPPEQLRRCREVLEPGASVMVRVRAKASDGEVRFFGDDASQMDNLLDDANMALR
VHVSARTADAEALKARLERARSGAIGKGGEIWLMIAGLDQGREAEIRLPGRYRLDGALRG
ALKSAPGVVMLEDA
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaggcggtgaacagtcaggggttcgtgcatctgcgggtccgctcggcctattcg
ctgctggaaggcgcgatcaaggcgggcaagatcggccggatggccgccgatgcggggatg
cccgccgtcgccgtggccgaccgggccaatctgttcggcgccctggagttcagccagacc
acccgcgacgtcggggtccagcccatcgtggcctgcgcgcttcccgtcgtcgggatcggc
ggacggatcaacgcccgctgggccaaaacgccgaccgtcgtgctgctggcccagaacgag
accggctggctgaacctgtgcgccctgtcctcgtccgcctatctggacgccggcgacatg
gccgagccgggcgtggcctgggatcaggtggccgcccgcgccgaggggctgatcctgctg
tcgggcggaccggacggcccggtcgacccgctgttcgcccagaacaagcccgccgaggcc
gcccaggcgctccaggccatgcacgccgccttcggcgaccgcttctatgtcgagctgcaa
cgtcacggcctggacgatgaaaagcgcgccgagccggggctggttcgctgggcctacgac
cacgacgttcccctggtcgccaccaacgacgtctattacgccaaggcggcccaggcgaag
tcgcacgacgccctgctgtgcatcgccgacggcgccttcaccggccaggacgaccgccgc
cgcatcaccggccagcactggttcaagccgcccgaggcgatgcgcgagctgttcgccgac
ctgcccgaggcctgcgacaacaccctcgacatcgcgcggcgctgcgccttcctggtgaag
acccacgcgccgatcctgccgcgcttcgacaccggcgcgggccgttcagagcccgacgaa
ctggcccaccaggcgcgcgagggtctgaaggcccgcctgacccaggtgacgcccgcggtc
ccggaagaggaatactgggcccgcctggaatgggaggtcgggatcatccagcagatgggg
ttcccgggctatttcctgatcgtctcggacttcatcaaatgggccaaggcgcacggtatt
ccggtcgggccggggcggggctcgggcgccgggtcgctggtggcctggtcgctgaccatc
accgacctggacccgttgcggttcggcctgctgttcgagcgcttcctgaatcccgagcgg
gtctccatgcccgacttcgacatcgacttctgccaggaacgtcgggaagaggtgatcgat
tacgtccaggcccattacggcaaggaccgggtcgcccagatcatcaccttcggcaccctg
caggcgcgcgcggtgctgcgcgacgtcggccgggtgctgcagatgccgctcggccaggtc
gaccggctctgcaagatggtgccgaacaatccggccaacccggtcaccctggcccaggcc
atcgacctggagccgcggctgaaggaggcgcgggattccgagccggcggtcaggaccctg
ctggagacggcgctggagctggaggggctctaccgcaacgcctcgacccacgccgccggc
atcgtcatcggcgaccggccgctgacggagctggtgccgctgtatcaggatccgcgctcc
accatcccggccagccagttcaacatgaagtgggtcgagccggccggcctggtgaagttc
gacttcctgggcctgaagaccctgaccacgctggaccgcgcgcggggctatctggagcga
cgcggggccgcgcccgactggaacggtctgccgctggacgacgcgcgcacctatgagctg
atggcctcgggccagacggtcggggtgttccagctggaatcccaagggatgcgcgacacg
ctgcgcaagatgcgctgcggctccattgaggagatcaccgccctgatctccctctatcgg
ccggggccgatggagatgatcgacacctacatcgaccgcaagttcggcagggccgaggtc
gattatctgcaccccagcctgaaggaggtgctgaccgagacctacggcgtcatcatctac
caggagcaggtgatgaagatcgcccagatcctggccggctacagcctgggcgaggccgac
ctgctgcgtcgcgccatgggcaagaagaagaaggaggagatggacttccagcgggcgcgc
ttcatcaagggcgcctcggaaaagggcgtctcggaggcgcagtccggcggcatcttcgac
ctggtggccaagttcgcgggctatggcttcaacaagtcccacgccgccgcctacgccctg
atctccttccagaccggttggctgaaggccaatcatccggtcgagttcttcgccgcctcc
atgagcctggacctgtcgaacaccgacaagctggcggtcttctaccaggacgccaagcgg
ttcgacgtgcccgtgctgccgcccgacatcaaccgctcctcggccgacttcgacgtgtcg
tgggaggacggcaggggcgcggtcctctatgcgctgggggccatccgcaacgtgggcctg
gaagccatgcgccacgtcatcgaggtgcgcgagcagggcggccgcttcgtcgacatcttc
gacttcctggaacgggtcgatccgcgttgcgtcaacaagcgggcgctggagggcctggcc
aaggccggggccttcgacagcctgcattccaaccgccgccagctggtcgaacaggccgac
gtcctgatggcctattgccagagcgtggcggccgaacgcgcctcggcccaggtcaatctg
ttcggcggcgaccaggcccacgccggccgcccgcgcctgaagagcgtcgaaccctgggtc
gggccggaccggctggaccaggaattgtcggcggtgggcttctatctgtccggccacccg
ctggacgacatggcccaggccctgaagcgcaagcgcgtgaccttcgtggccgaagccctg
cctctggccgagagcgggcacgaggccttccagatggccggcgtggtgcgccgtcgccag
gaacgggccagcgcccgcaccggcgaaaagttcgccttcgtcaccttctccgatccgacg
ggcgagttcgaatgcctcttcccgcccgagcagctgcgccgctgccgcgaggtgctggag
ccgggcgcctcggtgatggtgcgggtccgcgccaaggcgtccgacggcgaggtgcgcttc
ttcggcgacgacgcctcgcagatggacaatctgctggacgacgccaacatggccttgcgc
gtccatgtttcggcccgcaccgcggacgcggaggcgctgaaggcgcggctggaacgggcg
cggtccggcgccatcggcaagggcggcgaaatctggctgatgatcgccggtctggaccag
gggcgggaggccgagatccggcttccgggccgctatcgcctggacggggcgctgcgcggc
gcgctgaagtccgcgcctggcgtggtcatgctggaggacgcctga
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