Brevundimonas albigilva: M8231_10755
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Entry
M8231_10755 CDS
T08389
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
balb
Brevundimonas albigilva
Pathway
balb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
balb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M8231_10755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
balb03019
]
M8231_10755
Enzymes [BR:
balb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
M8231_10755
Messenger RNA biogenesis [BR:
balb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M8231_10755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Utp25_C
AAA_22
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
URI17032
LinkDB
All DBs
Position
complement(2139154..2140620)
Genome browser
AA seq
488 aa
AA seq
DB search
MGLNKALLQALASEGYTKPTPIQEKAIPDVMAGKDLLGIAQTGTGKTAAFALPILHRLAE
NRTPPVPRTTRALILSPTRELASQIGDSFKAYGAHLGFRVAVIFGGVKYGAQERALQQGL
DILVAAPGRLLDHIQQKTLDLSQTEIFVLDEADQMLDLGFIKPIRQIVSRMPARRQNLFF
SATMPTEIGKLAGELLKDPVKVQVTPQSTTVQRIKQSVVHIEQGRKRALLTELFSDPGFT
RCLVFTKTKHGADKVAAYLEAGGVEAGAIHGNKSQPQRERTLEAFKKGKLRVLVATDIAA
RGIDVDGVSHVVNFELPFVPEAYVHRIGRTARAGADGTAISFVAGDEMKLLKDIEKVTRQ
KIPAVDRRNDKQLAQLDASIMASGVGKKATLPEREGGERNEGGRGGRGRRNPHRDGVRPE
GGGQPHRQRRNRGGGGEAAAAPRPERTYNPMAGENVTPREPKPVGEMKRRPRRRRPSNGG
KGYGSAQG
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaacaaggcccttctccaggcgctggcgtcggaaggctacaccaagccgact
ccgatccaggaaaaggccattcccgacgtcatggccggcaaggacctgctgggcatcgcc
cagacgggtaccggcaagaccgccgccttcgccctgccgatcctgcatcgcctggctgag
aaccgcaccccgcccgtgcctcgcaccacgcgcgccctgatcctgtcgcccacgcgcgag
ctggccagccagatcggcgacagcttcaaggcctatggcgcccatctgggcttccgggtc
gcggtgatcttcggcggcgtgaaatacggcgcccaggaacgcgccctgcagcagggcctg
gacatcctggtcgccgcgccgggccgcctgctggaccacatccagcagaagaccctggac
ctgtcgcagaccgaaatcttcgtcctggacgaagccgatcaaatgctggacctgggcttc
atcaagccgatccgccagatcgtcagccggatgccggcgcgccgccagaacctgttcttc
tcggccaccatgccgaccgagatcggcaagctggcgggcgaactgctgaaggacccggtc
aaggtccaggtcacgccccagtccaccaccgtccagcgcatcaagcagtcggtcgtgcac
atcgaacagggccgcaagcgcgccctgctgaccgagctgttcagcgatccgggcttcacc
cgctgcctggtcttcaccaagaccaagcacggcgccgacaaggtcgcggcctatctggaa
gcgggcggcgtcgaggccggcgccatccacggcaacaagtctcagccccagcgcgaacgc
acgctggaagccttcaagaagggcaagctgcgcgtcctggtcgccaccgacatcgccgcg
cgcggcatcgacgtggacggcgtctcgcacgtcgtgaacttcgaactgcccttcgtgccg
gaagcctatgtgcaccgcatcggccggacggcccgcgcgggcgccgacggcaccgccatc
agcttcgtcgccggcgacgagatgaagctgctgaaggacatcgaaaaggtcacgcgccag
aagatcccggccgtcgatcgccgcaacgacaagcagctggcccagctggacgcctccatc
atggcttcgggcgtcggcaaaaaggcgaccctacccgagcgcgagggcggcgagcgcaac
gagggcggccgcggcggtcgcggtcgtcgcaacccgcatcgcgacggcgtccgtcccgag
ggcggcggccagccgcaccgccagcgtcgcaaccgcggcggcggcggagaggccgcggcg
gcgccccggcccgaacggacctacaatccgatggccggcgagaatgtgacgccgcgcgaa
cccaagcctgtcggcgagatgaagcgccggccgcgccgtcgtcgtccgtcgaacggcggc
aagggttacggctcggcccagggctga
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