Bacillus sp. LM 4-2: BsLM_0006
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Entry
BsLM_0006 CDS
T03908
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
balm
Bacillus sp. LM 4-2
Brite
KEGG Orthology (KO) [BR:
balm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
balm03032
]
BsLM_0006
03400 DNA repair and recombination proteins [BR:
balm03400
]
BsLM_0006
Enzymes [BR:
balm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BsLM_0006
DNA replication proteins [BR:
balm03032
]
Prokaryotic type
DNA Topoisomerases
BsLM_0006
DNA repair and recombination proteins [BR:
balm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BsLM_0006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AKE21807
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Position
4443..6374
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AA seq
643 aa
AA seq
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MNDVAMEQQQNSYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALA
GYCTDINIQIEKDNSITVVDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFDGSGYKVSG
GLHGVGASVVNALSTELDVTVHRDGKIHRQTYKRGVPVTDLEIIGETDHTGTTTHFVPDP
EIFSETTEYDYDLLANRVRELAFLTKGVNITIEDKREGQERKNEYHYEGGIKSYVEYLNR
SKEVVHEEPIYIEGEKDGITVEVALQYNDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTR
VINDYARKKGLIKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDT
LFSTAMETFMLENPDAAKKIVDKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCS
SKDPSISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMI
TALGTGIGEDFNLEKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMRQIIENGYVYIAQP
PLYKVQQGKRVEYAYNDKELEELLKTLPQTPKPGLQRYKGLGEMNATQLWETTMDPSSRT
LLQVTLEDAMDADETFEMLMGDKVEPRRNFIEANARYVKNLDI
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgacgtggctatggaacagcagcaaaacagttatgatgaaaatcagatacaggta
ctagaaggattggaagctgttcgtaaaagaccggggatgtatatcggttcgacaaacagc
aaaggccttcaccacctggtatgggaaattgtcgacaatagtattgacgaagccctcgcc
ggttattgtacggatatcaatatccaaatcgaaaaagacaacagtatcacggttgtagat
aatggccgcggtattccagtcggtattcatgaaaaaatgggccgtcctgcggtagaagtc
attatgacggtacttcatgccggaggaaaatttgacggaagcggctataaagtatccgga
ggattacacggtgtaggtgcgtctgtcgtaaacgcactatcaacagagcttgatgtgacg
gttcaccgtgacggtaaaattcaccgccaaacttataaacgcggagttccggttacagac
cttgaaatcattggcgaaacggatcatacaggaacgacgacacattttgtcccggaccct
gaaattttctcagaaacaaccgagtatgattatgatctgcttgccaaccgcgtacgtgaa
ttagcctttttaacaaagggcgtaaacatcacgattgaggataaacgtgaaggacaagag
cgcaaaaatgaataccattacgaaggcggaattaaaagttatgtagagtatttaaaccgc
tctaaagaggttgtccatgaagagccgatttacattgaaggcgaaaaggacggcattacg
gttgaagtggctttgcaatacaatgacagctacacaagcaacatttactcgtttacaaac
aacattaacacgtacgaaggcggtacccatgaagctggcttcaaaacgggcctgactcgt
gttatcaacgattacgccagaaaaaaagggcttattaaagaaaatgatccaaacctaagc
ggagatgacgtaagggaagggctgacagcgattatttcaatcaaacaccctgatccgcag
tttgagggccaaacgaaaacaaagctgggcaactcagaagcacggacgatcaccgatacg
ttattttctacggcgatggaaacatttatgctggaaaatccagatgcagccaaaaaaatt
gtcgataaaggcttaatggcggcaagagcaagaatggctgcgaaaaaagcccgtgaacta
acacgtcgtaagagtgctttggaaatttcaaacctgcccggtaagttagcggactgctct
tcaaaagatccgagcatctccgagttatatatcgtagagggtgactctgccggaggatct
gctaaacaaggacgcgacagacatttccaagccattttgccgcttagaggtaaaatccta
aacgttgaaaaggccagactggataaaatcctttctaacaacgaagttcgctctatgatc
acagcgctcggcacaggtattggggaagacttcaaccttgagaaagcccgttaccacaaa
gttgtcattatgacagatgccgatgttgacggcgcgcacatcagaacacttctgttaacg
ttcttttacagatatatgcgccaaattatcgaaaatggctacgtgtacattgcgcagccg
ccgctctacaaggttcaacaggggaaacgcgttgaatatgcgtacaatgacaaggagctt
gaagagctgttaaaaactcttcctcaaacgcctaagcctggactgcagcgttacaaaggt
cttggtgaaatgaatgccacccagctatgggagacaaccatggatcctagttccagaaca
cttcttcaggtaactcttgaagatgcaatggatgcggacgagacttttgaaatgcttatg
ggcgacaaggtagaaccgcgccgaaacttcatagaagcgaatgcgagatacgttaaaaat
cttgacatctaa
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