Bacillus sp. LM 4-2: BsLM_0147
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Entry
BsLM_0147 CDS
T03908
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
balm
Bacillus sp. LM 4-2
Pathway
balm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
balm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BsLM_0147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
balm03021
]
BsLM_0147
03400 DNA repair and recombination proteins [BR:
balm03400
]
BsLM_0147
Enzymes [BR:
balm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BsLM_0147
Transcription machinery [BR:
balm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BsLM_0147
DNA repair and recombination proteins [BR:
balm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BsLM_0147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
DUF961
PASTA
Motif
Other DBs
NCBI-ProteinID:
AKE21947
LinkDB
All DBs
Position
148456..149400
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEISDDAKFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSIQIDG
VLHEFSTIEGVVEDVTTIILHIKKLALKIYSDEEKTLEIDVQGEGTVTAADITHDSDVEI
LNPDLHIATLGENASFRVRLTAQRGRGYTPADANKRDDQPIGVIPIDSIYTPVSRVSYQV
ENTRVGQVANYDKLTLDVWTDGSTGPKEAIALGSKILTEHLNIFVGLTDEAQHAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELANKTEEDMMKVRNLGRKSLEEVK
AKLEELGLGLRKDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagattgaaaaaccaaaaatcgaaacggttgaaatcagcgacgatgccaaattt
ggtaagtttgtcgtagagccacttgagcgtggatatggtacaactctgggtaactcctta
cgtcgtatcctcttatcctcactccctggtgccgctgtaacatcaatccagatagatggt
gtactgcacgaattctcgacaattgaaggcgttgtggaagatgttacaacgattatctta
cacattaaaaagcttgcattgaaaatctactctgatgaagagaagacgctagaaattgat
gtacagggtgaaggaactgtaacggcagctgatattacacacgatagtgatgtagagatc
ttaaatcctgatcttcatatcgcgactcttggtgagaatgcgagtttccgagttcgcctt
actgctcaaagaggacgtgggtatacgcctgctgacgcaaacaagagagacgatcagcca
atcggcgtgattccgatcgattctatctatacgccagtttctcgtgtatcttatcaggta
gagaacactcgtgtaggccaagttgcaaactatgataaacttacacttgatgtttggact
gatggaagcactggaccgaaagaagcaattgcgcttggttcaaagattttaactgaacac
cttaatatattcgttggtttaactgacgaagctcaacatgctgaaatcatggttgaaaaa
gaagaagatcaaaaagagaaagttcttgaaatgacaattgaagaattggatctttctgtt
cgttcttacaactgcttaaagcgtgcgggtattaacacggttcaagagcttgcgaacaag
acggaagaagatatgatgaaagttcgaaatctaggacgcaaatcacttgaagaagtgaaa
gcgaaactagaagaacttggactcggacttcgcaaagacgattga
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