Bacillus sp. LM 4-2: BsLM_1756
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Entry
BsLM_1756 CDS
T03908
Name
(GenBank) DNA polymerase III PolC
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
balm
Bacillus sp. LM 4-2
Pathway
balm03030
DNA replication
balm03430
Mismatch repair
balm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
balm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BsLM_1756
03430 Mismatch repair
BsLM_1756
03440 Homologous recombination
BsLM_1756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
balm03032
]
BsLM_1756
03400 DNA repair and recombination proteins [BR:
balm03400
]
BsLM_1756
Enzymes [BR:
balm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BsLM_1756
DNA replication proteins [BR:
balm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BsLM_1756
DNA repair and recombination proteins [BR:
balm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BsLM_1756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
RNase_H_2
DEDDh_C
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AKE23554
LinkDB
All DBs
Position
1700840..1705204
Genome browser
AA seq
1454 aa
AA seq
DB search
MPEVPSLMMFLGRDTVLMEQLSVNRRQFQILLQQINMTDDTFMTYFEHGEIKKLTIHKAS
KSWHFHFQFKSLLPFQIYDTLTTRLTQSFAHIAKVTSSIEVQDAEVSESIVQDYWSRCIE
ELQGISPPIISLLNQQKPKLKGNKLIVKTKTDTEAAALKNKYSSMIQAEYRQFGFPDLQL
DAEIFVSEQEVQKFREQKLAEDQERAMQALIEMEKKDKESDEDQAPSGPLVIGYPIKDNE
EIRTLDSIMDEERRITVQGYVFDVETRELKSGRTLCIFKITDYTNSILIKMFAREKEDAT
LMKSLKKGMWVKARGSIQNDTFVRDLVMIANDVNEIKAKTREDSAPEGEKRVELHLHSPM
SQMDAVTGIGKLVEQAKKWGHEAIALTDHAVVQSFPDAYSAAKKHGIKMIYGMEANLVDD
GVPIAYNAAHRLLEEETYVVFDVETTGLSAVYDTIIELAAVKVKGGEIIDKFEAFANPHR
PLSATIIELTGITDDMLQDAPDVVDVIRDFREWIGDDILVAHNASFDMGFLNVAYKKLLE
VEKAKNPVIDTLELGRFLYPEFKNHRLNTLCKKFDIELTQHHRAIYDTEATAYLLLKMLK
DAAEKGIQYHDELNENMGQSNAYQRSRPYHATLLAVNSTGLKNLFKLVSLSHIHYFYRVP
RIPRSQLEKYREGLLIGSACDRGEVFEGMMQKSPEEVEDIASFYDYLEVQPPEVYRHLLE
LELVRDEKALKEIIANITKLGEKLNKPVVATGNVHYLNDEDKIYRKILISSQGGANPLNR
HELPKVHFRTTDEMLEAFSFLGEEKAKEIVVTNTQKVASLVDDIKPIKDDLYTPKIEGAD
EEIREMSYQRARSIYGEELPEIVEARIEKELKSIIGHGFAVIYLISHKLVKRSLDDGYLV
GSRGSVGSSLVATLTEITEVNPLPPHYVCPECQHSEFFNDGSVGSGFDLPDKTCPHCGTP
LKKDGHDIPFETFLGFKGDKVPDIDLNFSGEYQPQAHNYTKVLFGEDNVYRAGTIGTVAE
KTAYGYVKGYAGDNNLHMRGAEIDRLVQGCTGVKRTTGQHPGGIIVVPDYMDIYDFSPIQ
FPADATGSEWKTTHFDFHSIHDNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVM
KIFQGTESLGVTEEQIGCKTGTLGIPEFGTRFVRQMLEDTKPTTFSELVQISGLSHGTDV
WLGNAQELIHNNICELSEVIGCRDDIMVYLIYQGLEPSLAFKIMEFVRKGKGLTPEWEEE
MKNNNVPDWYIDSCKKIKYMFPKAHAAAYVLMAVRIAYFKVHHALLYYAAYFTVRADDFD
IDTMIKGSTAIRAVMEDINAKGLDASPKEKNLLTVLELALEMCERGYSFQKVDLYRSSAT
EFIIDGNSLIPPFNSIPGLGTNAALNIVKAREEGEFLSKEDLQKRGKVSKTILEYLDRHG
CLESLPDQNQLSLF
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgaggtaccttcacttatgatgtttttagggagggatactgtcttaatggaacag
ttatcagtaaacagaaggcagtttcaaattcttctgcagcagattaatatgacagatgat
accttcatgacatactttgaacatggcgagattaaaaagctgacaattcacaaagcttct
aagtcttggcattttcattttcaatttaaatctttgctgccttttcaaatatatgacaca
ttaacaacgaggctgacgcaatcgtttgcccacatagcaaaagtgacatcttcaattgaa
gttcaggatgccgaggtcagtgaaagtatcgtacaagactactggtcacgctgcatagaa
gaactgcagggcatttcgccgccgattatcagtcttttaaaccagcaaaaaccgaagctg
aagggcaataaactgattgtcaaaaccaaaacggatacagaagcggctgcgctaaaaaac
aaatacagttccatgattcaagcagaataccgtcaatttggctttccggatcttcagctt
gatgctgaaatatttgtatccgagcaagaagttcaaaagtttcgggagcaaaagcttgcg
gaagaccaagagcgggctatgcaggccttgattgaaatggagaagaaagataaagaaagt
gatgaagaccaagcaccatctggtcctcttgttatcggttatccaattaaagataacgag
gaaatccggacgcttgacagcatcatggacgaagaacggagaattacggtccaaggttat
gtgtttgatgtggagacgcgcgagctgaagagcgggcgcacgctgtgtatcttcaaaatt
acagactatacaaatagtattttgatcaaaatgtttgcacgtgaaaaagaagatgcgacg
ctgatgaagtctctgaaaaaaggaatgtgggtaaaagcacgcggaagcattcaaaatgat
acatttgtcagagaccttgtcatgatcgcaaatgacgtaaacgaaataaaagcaaaaacc
cgtgaagattcagcacctgaaggagaaaaaagagtggaattgcatcttcattccccaatg
agccaaatggatgctgttacgggtatcggaaagcttgtcgaacaggcgaaaaaatggggg
catgaggccatcgctttgaccgaccatgctgtcgttcaatccttccctgatgcgtattct
gcggccaaaaagcatggaattaaaatgatttacgggatggaagcgaatctcgtggatgat
ggcgtgccaattgcttataatgccgcacatcgtctgctcgaagaagaaacatatgttgtt
tttgacgttgagacgacaggattgtctgctgtatacgataccattattgagctggctgca
gtaaaagtaaaaggcggagaaattattgataaatttgaggcgtttgcgaacccgcatcgt
ccgctttccgccacaatcatagagctgacagggatcacagatgatatgctacaagacgct
ccggatgtcgtagatgtaataagagatttcagagaatggattggcgatgatattcttgtc
gctcataatgcaagctttgatatgggattcttaaatgtagcctataaaaagcttcttgaa
gtcgaaaaagctaaaaacccagtcattgatacgcttgaacttggacgttttctctatccg
gaatttaagaaccaccggttgaacacactttgtaaaaagtttgatatcgaactcacacag
catcaccgtgcgatctatgatactgaggcaaccgcttatttgcttctgaaaatgctgaaa
gacgcagctgaaaaaggtattcagtaccatgatgagttgaatgaaaatatgggtcagtcc
aatgcttatcaaagatcaagaccgtatcatgcaacattacttgccgtgaacagcacggga
cttaaaaatttatttaagcttgtgtcactttctcatattcattatttttacagagtgccg
cgtattccgagatctcagcttgagaaatacagggaagggcttctgatcggttctgcctgt
gacaggggagaggtttttgagggaatgatgcaaaaatcgcctgaagaggtggaagatatc
gcgtcattctatgattaccttgaggttcagccgcctgaagtgtatcgtcacttgctggag
cttgaactggtccgtgatgaaaaagcgctgaaagaaattattgcgaatatcacgaagctg
ggggaaaagcttaataaaccggttgttgctacgggaaatgttcattatttgaatgatgag
gataaaatctacagaaagattttaatatcctcacaaggcggggcaaatccgctgaatagg
catgaactgccgaaagtgcattttagaacgacagacgaaatgcttgaagctttttctttc
ttaggtgaagaaaaagcgaaggagatcgtagtcaccaatacccaaaaggttgcttcttta
gttgatgacatcaagccgattaaagatgatttatatacgccgaaaatcgaaggcgctgat
gaagagatcagagaaatgagctatcagcgtgcaagaagcatttacggggaagagctgcct
gaaattgtcgaagcgcggattgaaaaagagttaaagagtattattggccacggatttgct
gttatttacttgatctctcacaaacttgtaaaacgttcactagatgatgggtatctcgtt
ggttcccgtggttccgtaggatcttcattagttgcgacacttactgagattactgaggta
aacccgctgccgccgcactatgtttgtcctgagtgccagcattctgagttctttaatgac
ggttctgtcggttctggttttgacctgcctgacaagacatgtcctcattgcggaacgcct
ttgaaaaaagacggccatgatattccatttgaaacgttcttaggatttaaaggggacaaa
gtacctgatatcgatttgaacttctcaggggaatatcagccgcaagcacacaattacaca
aaagtattgttcggagaagacaatgtatatcgtgcgggaacaataggcacggtggcagaa
aaaacagcctacggttatgtaaaaggctatgccggagacaacaatcttcatatgcgcggt
gccgaaatagatcggctcgtacagggatgcacgggtgtaaaacgtacaactggacaacac
cctggcggtattatcgtagttccggattatatggatatttatgatttttcaccgatccag
ttcccggcagatgccacaggttcagagtggaaaacgactcattttgatttccactccatc
catgacaacctgttaaaacttgatattctcggacacgatgacccgactgttattcggatg
cttcaagacttaagcggaatagatccgaaaacaattccgacggatgatcctgaagtgatg
aagatcttccagggaaccgaatcactcggtgtgactgaagaacagattggctgtaaaacg
ggcactcttggaattcctgaattcggaacccgatttgtccggcagatgcttgaagataca
aagccaacaactttttctgagctcgttcagatttcaggcttgtctcacggaactgatgta
tggcttggcaatgcacaggagctcatccacaataatatttgtgagctgagtgaggttatc
ggctgccgtgatgacattatggtttatttaatctatcaaggccttgaaccgtcccttgcc
tttaaaatcatggaattcgtgcgtaaaggaaaaggattaacgcctgaatgggaagaagaa
atgaaaaataacaatgtcccagactggtatattgattcctgtaaaaagattaaatacatg
ttcccgaaagcccacgccgcggcatatgtcttaatggcagtccgcattgcttactttaaa
gtgcatcatgctcttttgtattatgcggcttattttaccgttcgtgcagatgactttgat
attgatacaatgatcaagggctctacagcaatcagagcggtaatggaggatataaacgct
aaaggacttgatgcttcaccgaaggaaaagaaccttctgactgttttagaattagcgctt
gagatgtgtgagagaggctattcattccaaaaagtcgatttatatcgctccagcgccaca
gagtttattattgacggcaacagtcttattccgccgtttaactctattccagggttaggg
acgaacgctgctttgaacattgtaaaagctcgtgaagaaggcgaattcctctcaaaagaa
gatttgcaaaagagagggaaagtatcaaaaacgattttagagtacttagatcgccatggc
tgtctggagtcactgcctgatcaaaaccaattgtcactgttctaa
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