KEGG   Bacillus sp. LM 4-2: BsLM_1792
Entry
BsLM_1792         CDS       T03908                                 
Name
(GenBank) phosphodiesterase
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
balm  Bacillus sp. LM 4-2
Pathway
balm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:balm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BsLM_1792
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:balm03019]
    BsLM_1792
Messenger RNA biogenesis [BR:balm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BsLM_1792
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KhpA-B_KH KH_2
Other DBs
NCBI-ProteinID: AKE23590
LinkDB
Position
1741071..1742633
AA seq 520 aa
MTPIMMVLISILLILLGLVVGYFVRKTIAEAKIAGARGAAEQILEDAKRDAEALKKEALL
EAKDEIHKLRIDAEQEVRERRNELQKQENRLLQKEENLDRKHEGIDKREAMLEKKDHSLN
ERQQHIEEMESKVDEMIRMQQSELERISSLTRDEAKQIILERVENELSHDIAIMTKETEN
RAKEEADKKAKNILSLALQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVEKSRREVDDYIR
EMGEQTTFEVGVHGLHPDLIKILGRLKFRTSYGQNVLKHSMEVAFLAGLMASELGEDAKL
AKRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDEEPTSIIAVLV
AAADALSAARPGARSETLENYIRRLEKLEEISESYEGVEKSFAIQAGREVRIMVKPDSIN
DLEAHRLARDIRKRIEDELDYPGHIKVTVIRETRAVEYAK
NT seq 1563 nt   +upstreamnt  +downstreamnt
atgaccccaattatgatggttctcatctccattttgctgattctactcggtttagttgtt
ggctactttgttcgtaaaaccattgccgaagcgaaaattgcgggcgcacgcggtgcagcc
gagcaaattcttgaagatgcgaagcgtgatgctgaagcactgaaaaaagaagctctgctt
gaagcaaaggatgaaatccacaaacttcgaatagatgctgaacaggaagttcgtgaaaga
cgaaatgagcttcaaaaacaagaaaaccgtttactccaaaaggaggaaaaccttgatcgc
aaacatgagggaattgataaacgggaagcgatgttggagaagaaagatcattctctgaat
gaacgacaacaacatattgaagagatggaaagcaaagtggatgagatgattcgtatgcag
cagtctgagttggaacgaatttcgagtctgactcgtgacgaagcgaaacaaatcattctt
gagcgggttgaaaacgagctttcacatgacatcgccatcatgacaaaagaaactgaaaac
cgtgcgaaagaagaggcggataagaaagcgaaaaacattctttcactcgccttacagcgc
tgcgcagcggaccacgttgccgaaacaacggtatcagttgtcaatcttccaaatgatgag
atgaaaggacgtatcatcggacgggaagggcgtaacattcgtacgcttgaaacgctgaca
ggaattgacctgattattgatgatacgcctgaagctgtcattctttccggatttgatccg
atcagacgtgagacagccagaattgctcttgataaactcgttcaggatggccgtattcat
ccggcacggattgaagaaatggttgaaaaatctcgccgcgaggtcgatgactatattcgt
gagatgggtgagcaaacgacatttgaggttggcgttcatggcctccacccagatctcatc
aagatcctcggccgcttaaagttccgtacaagctacggtcaaaatgtgcttaagcattcc
atggaagtcgcattcttggccggtctaatggcatcggagcttggtgaagacgcaaagctt
gctaaacgtgcgggtcttcttcacgacatcgggaaagcaattgaccatgaagtagaagga
agccacgttgagatcggggtagagcttgcgaccaaatataaagagcacccagtcgtgatt
aacagtattgcatcacaccacggggacgaggagccgacttccattattgctgtactggta
gctgcagcagatgcgctttccgctgcaagacctggcgcaagaagtgagacgctcgagaat
tatattcgaagacttgaaaaactcgaagaaatttctgagtcctacgaaggtgttgaaaaa
tcatttgccattcaggctggacgcgaagtgcgaattatggtgaagccggattcaattaat
gatcttgaggctcatcgactggcgcgagatatccgcaagcgaattgaggacgagctcgat
tatccaggtcatattaaggtgacagtaatcagagagactcgagccgtagagtatgcaaaa
taa

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