Bacillus sp. LM 4-2: BsLM_2223
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Entry
BsLM_2223 CDS
T03908
Name
(GenBank) non-specific DNA-binding protein HBsu; signal recognition particle-like (SRP) component
KO
K03530
DNA-binding protein HU-beta
Organism
balm
Bacillus sp. LM 4-2
Brite
KEGG Orthology (KO) [BR:
balm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
balm03032
]
BsLM_2223
03036 Chromosome and associated proteins [BR:
balm03036
]
BsLM_2223
03400 DNA repair and recombination proteins [BR:
balm03400
]
BsLM_2223
DNA replication proteins [BR:
balm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BsLM_2223
Chromosome and associated proteins [BR:
balm03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BsLM_2223
DNA repair and recombination proteins [BR:
balm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BsLM_2223
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
Rpf1_C
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
AKE24021
LinkDB
All DBs
Position
complement(2227431..2227757)
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AA seq
108 aa
AA seq
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MIINELNVSFWEEVKGMNKTELINAVAEASELSKKDATKAVDSVFDTILDALKNGDKIQL
IGFGNFEVRERSARKGRNPQTGEEIEIPASKVPAFKPGKALKDAVAGK
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atgataataaacgaactgaatgtatccttttgggaggaggtgaaaggcatgaacaaaaca
gaacttatcaatgcggttgcagaagcaagcgaattgtctaaaaaagacgctacaaaagca
gttgactctgtttttgatacgatcttagatgcacttaaaaacggtgataaaatccaactg
atcggttttggtaacttcgaggtgcgtgaacgttctgcacgtaaaggacgcaatcctcaa
acaggtgaagaaatcgaaattccagcaagcaaagtacctgctttcaaaccaggtaaagcg
cttaaagacgcagttgccggaaaataa
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