Bacillus sp. LM 4-2: BsLM_3735
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Entry
BsLM_3735 CDS
T03908
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
balm
Bacillus sp. LM 4-2
Pathway
balm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
balm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BsLM_3735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
balm03021
]
BsLM_3735
03019 Messenger RNA biogenesis [BR:
balm03019
]
BsLM_3735
Transcription machinery [BR:
balm03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BsLM_3735
Messenger RNA biogenesis [BR:
balm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BsLM_3735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
OB_RNB
ATPase_2
AAA_22
AAA
NACHT
EZH2_WD-Binding
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AKE25532
LinkDB
All DBs
Position
complement(3656859..3658142)
Genome browser
AA seq
427 aa
AA seq
DB search
MKDVSISSLENMKLKELYELARHYKISYYSKLTKKELIFAILKANAEQEDLLFMEGVLEI
IQSEGFGFLRPINYSPSSEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYYGLLHVEA
VNGDDPESAKERVHFPALTPLYPDRQMVLETKPNFLSTRIMDMMAPVGFGQRGLIVAPPK
AGKTMLLKEIANSITANQPEAELIVLLIDERPEEVTDIERSVAGDVVSSTFDEVPENHIK
VAELVLERAMRLVEHKKDVIILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFF
GAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRSLAERRIFPAIDIR
RSGTRKEELLVPKEHLDRLWSIRKTMSDSPDFAEKFMRKMKKTKTNQEFFDILNQEWKQA
NLSSARR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgtatctatttcctctttggaaaatatgaaattgaaagagctttatgaactt
gcaagacattataaaatctcctattacagcaaactgacaaaaaaagaactcattttcgcc
attctgaaagcgaatgcagaacaggaagatctgctgtttatggaaggcgttcttgagatc
atccagtctgaaggtttcggcttcctgagaccgatcaactactctccaagctcagaagac
atttacatctcagcttcacaaatccgccgtttcgatttgcggaacggagacaaagtatct
ggcaaggttcgcccgccaaaagaaaatgagcgttactatggacttttgcacgttgaagca
gtaaatggggatgatcccgaatctgcaaaagagcgtgtgcatttcccggctcttacgcca
ctttatccggatcgtcaaatggtgcttgaaacaaagccgaacttcttgtctacaagaatt
atggacatgatggcgccggttggatttgggcagcgcggattgattgttgcgccgccgaaa
gccggaaaaacgatgctgctgaaggaaattgccaacagcattacagcgaaccagcctgaa
gcagagctgatcgtgcttttaattgacgaaagacctgaggaagtaaccgatatcgagcgc
tctgtagctggggatgtcgtcagctcaacgtttgatgaagtgccggaaaaccatatcaaa
gtggccgagcttgtgcttgaacgtgcgatgcgtctcgtggaacacaaaaaagacgtcatt
atcctgatggacagcatcacacggcttgcccgcgcctacaacttagtgattccgccaagt
ggaagaacgctttccggggggattgacccagcggcgttccaccgtccgaaacgcttcttc
ggggctgcgagaaatatcgaagagggcggcagcttaaccatccttgctacggctctggtt
gatactggttcacgtatggatgatgtcatttatgaagaattcaagggaacaggcaacatg
gagctccatcttgaccgctctcttgccgagcgccgcatcttccctgccatcgatatccgc
cgttcaggaacgcgcaaagaagagctgcttgtgcctaaagagcatcttgatcgtttatgg
tctatccgcaaaacgatgtctgattcacctgatttcgcagaaaagttcatgagaaaaatg
aaaaaaaccaaaacaaaccaggaatttttcgatattctcaatcaagaatggaaacaggca
aatctatcatctgcaagaaggtaa
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