Bacillus sp. LM 4-2: BsLM_4136
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Entry
BsLM_4136 CDS
T03908
Name
(GenBank) apurinic/apyrimidinic endonuclease
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
balm
Bacillus sp. LM 4-2
Pathway
balm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
balm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BsLM_4136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
balm03400
]
BsLM_4136
Enzymes [BR:
balm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
BsLM_4136
DNA repair and recombination proteins [BR:
balm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BsLM_4136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AKE25933
LinkDB
All DBs
Position
complement(4051030..4051788)
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AA seq
252 aa
AA seq
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MKLISWNVNGLRAVMRKMDFLSYLKEEDADIICLQETKIQDGQVDLQPEGYHVYWNYAVK
KGYSGTAVFSKQEPLQVIYGIGVEEHDQEGRVITLEFENVYVMTVYTPNSRRGLERIDYR
MQWEEALLSYILELDQKKPVILCGDLNVAHQEIDLKNPKVNRNNAGFSDQERGAFTRFLE
AGFVDSFRHVYPDLEGAYSWWSYRAGARDRNIGWRIDYFVVSERLKEQIEDASISADVMG
SDHCPVELIINI
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgatttcatggaatgtaaacggcctgcgggctgtgatgagaaaaatggatttc
ctctcttatttgaaagaagaggatgcagatattatatgtcttcaggaaacgaagatacag
gacggccaggttgatctccagcctgaaggctatcatgtgtactggaattatgcagtgaaa
aaaggatattccggcacagctgttttttctaagcaagaaccgctgcaggtcatctacggt
atcggagtagaagagcatgaccaagaaggcagagtgattacgctggaatttgaaaacgtg
tatgtgatgactgtttacacgcccaattccagaaggggattagagcggattgattaccgc
atgcaatgggaagaggctttattgtcttatattcttgaattggatcagaaaaaaccagtg
attttatgcggtgatttgaatgtagcccatcaggagattgatttgaaaaatccaaaggtg
aaccggaataacgctggattttcagatcaagaaagaggggcattcactcgtttcttagaa
gctggctttgttgattctttccgtcatgtttatcctgatcttgaaggcgcttattcctgg
tggtcgtatcgtgccggcgcccgggacagaaatatcggatggcggattgattattttgtt
gtttctgaaagacttaaggaacagattgaagatgccagcatatcagcggacgtcatgggt
tccgaccattgtcctgttgaacttatcatcaatatatga
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