Bartonella alsatica: HWV54_00455
Help
Entry
HWV54_00455 CDS
T06670
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
bals
Bartonella alsatica
Pathway
bals03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bals00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HWV54_00455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bals03019
]
HWV54_00455
03009 Ribosome biogenesis [BR:
bals03009
]
HWV54_00455
Enzymes [BR:
bals01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
HWV54_00455
Messenger RNA biogenesis [BR:
bals03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HWV54_00455
Ribosome biogenesis [BR:
bals03009
]
Prokaryotic type
rRNA processing factors
HWV54_00455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
QLC51459
UniProt:
A0ABX6QEW5
LinkDB
All DBs
Position
complement(99781..102408)
Genome browser
AA seq
875 aa
AA seq
DB search
MSNKMLIDASHPEETRVVVVHGNTIEEFDFESEHKKQLKGNIYLARITRVEPSLQAAFVE
YGGNRHGFLTFSEIHPDYYQIPMADRLALLEEEEKAVVGDNYTDVSTEETNKNKKRSRKT
KKDKRTNIMAADIETDMISEITTVDDAEEVFNVNVFHEGIEMVGAEDVREELPTYQRKQG
RQYKIQEVIKRRQILLVQIIKEERGNKGAALTTYLSLAGRYSVLMPNTARGGGISRKITN
IQDRKRLKEIVKELAVPKGMGVILRTAGANRTKAEIKRDYEYLTRLWDTVRTLTLKSTAP
CLVHEESNLIKRSIRDLYNKNINEILVSGDQGYREAKDFMRMLMPSHAKVVQPYREPIPI
FVRNNIEIQLDKMLHPQVSLKSGGYIVINQTEALVAIDVNSGRSTKELSVEKTALQTNLE
AAEEIARQLRLRDLAGLIVIDFIDMLEERNVKLVEKKLKDCLKSDRARIQVGHISHFGLL
EMSRQRIRISVLESTTQPCPHCAGTGNVRSESSIALHVMRSIEEYLLHNPQHNITVRTPA
ATALYVLNHKRNILVNLEARFKLNISIEADDSIGTQHLIISKGTIAEAVSQSPLVFEDES
VEEVDDEILVDSSFIEDKTLVEANQKRWRKNRQGEMNDNSLSTVHKKDETLNDDSRRRIR
RRGRRGGRRNQDNGFYQLRIPYAEPVGDFAKQALEEIRTEYRKRRTPTTKPVQFEEEKDS
TQHLSIQQDETVKVDTIVKPKKRKARSSKAVQKQQTIENEQSIIIAEPVEEKSIAGSIQK
VKTKKVDKTAHKAVEKIIENGKKSTRKAQKKPLSKELTPTKEILEQRSVLEKSVEQTSSK
VEKKAKHPVVISSTPDDSPKTERIGWWKRRKLSKS
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacaaaatgcttatagatgcctcccatccggaggaaacacgtgttgttgttgtt
cacggcaacacaattgaagaatttgattttgaatcagaacataaaaagcagctcaagggg
aatatttatttagcacgtattacacgtgtagaaccatcgctccaagcagcttttgtcgaa
tatggtgggaaccgccatggttttttgacgttttctgaaattcatcccgattattatcaa
attcctatggctgatcgtctcgctcttcttgaagaagaagaaaaagctgtagtaggagac
aattatacagatgtctctactgaagaaacaaacaaaaataaaaaacgttcccgaaaaaca
aaaaaagataagcgcactaatatcatggctgcagatattgaaactgatatgatatctgag
ataacaacggttgatgatgcagaagaagtgtttaacgtaaatgtttttcatgaaggtatc
gaaatggttggtgcagaggatgtgcgtgaagaacttcccacctatcaacgaaaacaaggg
cgtcaatataaaattcaagaagtgattaaacgacgtcaaattttgttggtgcaaattatt
aaggaagaacgtggtaataaaggtgctgcacttacaacatatttatctttagcaggccgt
tattctgttttaatgcctaacacagcacgtggtggtggcatttcaaggaaaattacaaat
atacaagatcgcaagcgtcttaaagaaattgtaaaagaattagcagttcccaaaggcatg
ggagttattctgcgaactgctggagcaaatagaactaaagctgaaattaaacgcgattac
gaatatctcactcgactctgggatactgttcgcactttgacactcaaatccacagcgcca
tgtcttgttcatgaagaaagcaatcttataaagcgttctatccgggatctttacaataag
aacatcaatgaaattcttgtttctggtgatcaaggatatcgtgaagcaaaagattttatg
cgtatgcttatgccaagtcacgcaaaagttgtacaaccttatcgcgaacctattccaatt
ttcgtacgtaataatattgaaattcaacttgataaaatgttgcatccacaagtttcttta
aaatctggtggttatattgttattaatcaaacagaagcgcttgttgctattgatgtaaac
tctggccgctctacaaaagagctttctgtcgaaaaaacagcattacaaaccaaccttgaa
gctgcagaagaaatagcgcgtcaattacgtttacgtgatcttgctggtttgattgtgatt
gattttatagacatgcttgaagagcggaatgtgaagctggttgaaaaaaagttgaaagat
tgcttaaaaagtgatcgtgcccgtattcaagttggtcacatttcacacttcggccttttg
gaaatgagtcgtcaacgtattcgcatatcagttttagaaagtacaacgcaaccctgcccc
cattgtgctggaacgggtaatgttcgttctgaatcatcaattgctttacatgtcatgcgc
tcaattgaagaatatcttcttcataatccgcaacataatattactgtacgtacacccgca
gcaacagcgctttatgtgttaaatcataaacgcaatattcttgttaatctagaagcgcgc
tttaagcttaatattagtattgaagcagatgatagcattggaacgcaacatcttattatt
tctaaaggtacaatagcagaagcagtttctcagtctccattggtttttgaagatgaaagt
gtagaagaagtagacgatgagattttagtagatagctcttttattgaagataaaacactc
gttgaagcaaatcagaaacgttggcgtaaaaatcgtcaaggagagatgaatgataattct
ctttccaccgttcataaaaaagatgaaacgctaaatgatgattcccgtcgtcgaatccgt
cgtcgaggacgtcgtggcggtcgccgtaatcaggataatggcttttatcagcttcgtatt
ccttatgcagaaccggtaggagactttgctaagcaggccttagaagaaattagaacagaa
taccgcaaacgccgtactccaactacgaaacctgttcaatttgaagaagagaaagacagt
acacaacatttaagtatacaacaagatgaaactgtaaaagttgatacgattgttaaacct
aaaaaacgtaaagcgcgttcttcaaaagcagtgcaaaaacagcaaaccattgaaaacgaa
cagagtataataatagcagaacctgtagaagaaaaatctatagccggctcgatacaaaaa
gttaaaacaaaaaaagtagataaaactgctcataaggcggtagaaaaaattattgaaaat
ggcaaaaaatcaacacgaaaagcacaaaaaaagccactctctaaagaattaactccaaca
aaagagatattagaacagagatctgtcttagaaaaatctgtcgaacaaacttcctccaaa
gttgagaaaaaagccaagcatcctgttgttatatcatcaacgcctgatgattctccaaaa
actgagcgtattggttggtggaaacgcagaaagctttccaaaagttaa
DBGET
integrated database retrieval system
