Bartonella alsatica: HWV54_01120
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Entry
HWV54_01120 CDS
T06670
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bals
Bartonella alsatica
Pathway
bals03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bals00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HWV54_01120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bals03019
]
HWV54_01120
Enzymes [BR:
bals01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HWV54_01120
Messenger RNA biogenesis [BR:
bals03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HWV54_01120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QLC51580
UniProt:
A0ABX6QFD5
LinkDB
All DBs
Position
complement(250565..251977)
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AA seq
470 aa
AA seq
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MVVGLRKDFILNINRENVFAKLGLPALLIKNLLIAGMSKPKPIQEQAIPVMLKGHDILGI
AQTGSGKTLAFSLPILSQILALGDKRSPKTARALILAPTRELTVQINETIRAVAKGTHLS
TCLLFGGVSRLKQIKRMETGVDVLIATPGRLRDLVCEKYVDLSQSRFLVLDEADRMLDMG
FIHDIREIAKLLHQERQTALFSATMPKEIIALTKFLLEDPIKIEIVLQGTTAAEITQKLY
CVPTSEKKKVLGKLLANPAFTSVIVFTRTKYGADAVTRSLARMGYLVATIHGNKSQSARQ
SALKAFRERTVQVLVATDIAARGIDIPGISHVINYDLPDEAESYVHRIGRTGRNGASGEA
ITLFDEGVEGARLRAIERLIRIRLVSEAIPEQFAAFPEKPTIPKSGDKENGEELHFRKSK
RQKKFLSRKDKAKQLKDKNSPSSNEKHKKAKKVAKRAKSFRFCKSVKKAA
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggttgttggactgaggaaagattttattttgaatataaatagagaaaatgtttttgca
aaattgggcttacctgctcttttgattaaaaatttactcattgctggtatgagtaaacct
aaacctattcaagaacaagctattccagtgatgttaaaaggtcatgatattttgggtatt
gcacaaacaggctctggaaaaaccttggcatttagcttacctattttgagtcagattttg
gctttaggcgataagcgttcccctaaaactgcgcgtgctttgattttggctcctacgcgt
gaactcactgttcagattaatgaaacaattcgtgctgttgcgaaaggaacgcatctttca
acatgtcttctttttggtggagtatcacgtttaaaacaaattaaacgtatggaaacaggt
gtagatgttctcatagcaacgccaggtcgtttaagagatcttgtttgtgaaaaatacgtt
gatctttctcaatctcgttttttagttctggatgaagcagatcgtatgttagatatgggc
tttattcatgatatacgggagatcgcaaagcttttacatcaagagcgtcaaacagcactt
ttttctgcgacaatgccgaaagaaatcatagcacttacgaaatttttgctcgaggatccg
attaaaatagagatcgttcttcaagggacaactgctgcagaaatcactcaaaaattgtat
tgtgtccctacaagtgaaaaaaagaaggttttaggtaaacttttagcgaatccagctttt
acttcggttattgtttttacccgaactaaatacggtgctgatgctgttacacgtagttta
gcaaggatggggtatttagttgctacaattcatggaaataaatcacagagtgctcggcag
tctgctttgaaagcttttcgtgaaagaacagtacaggttcttgttgcgacagatatcgca
gcacggggtattgatataccaggaataagccacgttattaattatgatttaccagatgaa
gctgaaagttatgtgcatcgaatcggtcgaacaggacgcaatggtgcatctggtgaggct
atcacactttttgatgaaggagtagaaggagcgcggttacgtgccatagagcgcttgatt
cgtatacgattagtctctgaagctattccagaacagtttgctgcatttccagaaaagccg
actataccaaaaagtggagataaagaaaatggtgaagaactgcattttagaaaatctaaa
cgtcagaagaaatttttaagtcgtaaagataaagctaaacagttaaaggataaaaattct
ccatcttcaaatgaaaaacacaaaaaagcaaaaaaagtagcaaaacgtgccaagtctttt
cgtttttgcaagtcagtgaagaaggcagcctaa
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